Sphaerochaeta globosa: SpiBuddy_2199
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Entry
SpiBuddy_2199 CDS
T01439
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbu03009
]
SpiBuddy_2199
Enzymes [BR:
sbu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SpiBuddy_2199
Ribosome biogenesis [BR:
sbu03009
]
Prokaryotic type
ribosomal protein modification factors
SpiBuddy_2199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADY14018
UniProt:
F0RSW6
LinkDB
All DBs
Position
complement(2387635..2388984)
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AA seq
449 aa
AA seq
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MKKVYMENLGCSKNQVDAETLIKLLEDDQFTHTTEVAEADLIMVNTCGFIESAREQSIES
FFSLHEANPQAKIILSGCMAQRYAKELQDELGEASAIFGNRDLSKIHEVVRQVFAGDRVI
ELPSYPDLANEVYERNELLSFPGSAYLKISEGCNHWCSYCAIPLIRGGLRSKLKETILIE
ARTLIERGIKEINLIAQDLAAYGTDGPDKSSKFMDLLEALVALDGDFSIRLLYIYPDAFP
PTLAKFIAEHKKVLPYFDIPFQHADQKVLQSMGRTGTKESYLSLIESIRNTVPEAVIRST
ILLGYPTEDDKAFAEVLDFLSKAKLDWVGSFTYSREEGTKAYSLRGEREHKKANKLAQGY
QAQLQALQGPITNANLARFVGKEYEVLIEELVEGEDLAIGRMYGQAPEVDGLTVVLGRSL
KPGQKVLCGIRAVNGLDLEAVPVGGALNG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtatatatggaaaatcttggttgttccaaaaaccaagtcgatgccgagacg
ctgatcaagctgcttgaggatgaccagtttactcacactactgaggtggcggaagccgat
ttgatcatggtcaacacctgtggtttcattgagtcggcaagagagcagtcaatcgaatcc
tttttctcgctgcatgaggcaaacccccaggcaaaaatcattctcagcggatgcatggcc
caacggtatgccaaggaactacaggatgaattaggagaagcttcagccattttcggcaac
cgcgacctttccaaaatccatgaggtggtccgacaggtttttgcaggggacagggtgata
gagctgccgtcctatcctgatctggcgaatgaggtatatgagcgcaatgaattgctgtcc
ttccccggcagtgcgtacttgaaaatcagtgaaggatgcaaccattggtgttcctactgt
gccattcccctcatccgcggtggcctgcgaagcaagctgaaagaaacaatccttattgag
gcaagaacgctcatcgagcggggaatcaaggaaatcaatctcatcgcccaggatcttgca
gcctacggtaccgacggaccggacaagtcaagcaagtttatggacctcttggaggctttg
gtcgcattggatggcgatttttccatccgactgctctatatctatcccgatgcgttcccc
ccaacgctcgccaagttcattgcagagcataagaaggtgttgccctatttcgatattcct
ttccagcatgccgaccaaaaagtgctccaaagcatgggtcggaccggtacaaaagagagt
tacctttcgctcatagaatcgattcgcaataccgtacctgaagcggttatccgttcgacg
atactattggggtatccgacagaggatgacaaggcttttgccgaggtactggatttcctg
tccaaggcgaaactcgattgggttggttccttcacctatagcagggaggaggggaccaag
gcttactcgcttcgcggcgagcgtgagcacaagaaggcaaacaagttggcccaagggtat
caggcgcaattacaagccttgcagggtccgatcaccaatgcaaaccttgctcggtttgtg
ggcaaggagtatgaggtactcatcgaggagctggtagaaggtgaagatcttgccatcggg
cgtatgtatggccaggctcctgaagttgatggattgaccgttgttctgggaagatcactt
aaaccaggacagaaagtgctttgcggtatcagagctgtcaatggcctggatttggaagcc
gtcccggtaggaggagctcttaatggctga
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