Salmonella bongori serovar 48 z41 --: N643_07530
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Entry
N643_07530 CDS
T03249
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Pathway
sbv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N643_07530
Enzymes [BR:
sbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
N643_07530
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
DUF1601
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AID24989
LinkDB
All DBs
Position
1622067..1624061
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AA seq
664 aa
AA seq
DB search
MVFMMKDVQEQTALNPLHTYWRLSAECNVLHLSLTGEKNAEQTIHLSPEQAERIREMTEM
TSSLLLTLPPEKQAISLHLVGRRINKREWAGSLSAWADMPADPLTQVQELSFAEQIVSEA
SSLIVILNNRGKICRFNRLCEEYTGLKEQDVIGQSVFTLFMSRREAAASRRYHNDFFHNG
NAYEIERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICAGTDITEERRTQERLRILANTD
TVTGLPNRNAIHEFINNAIASSGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL
LSCLEEDQLLARLGGDEFIVLATQTSQGSLEAVASRILTRLRQPFRIGLIEVYTGCTIGI
SLAPQHGQDSDSIIRNADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLNTHLREALEND
HLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPREFISYAEESGLIVPLGRWVILDVV
RQIAKWRNKGINLRVAVNFSARQLADQTLFTDLKQVLHDLNFEYCPIDVELTESCLIEND
ALALTVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQSLSQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGINERQGFLFAKPMPAASFERWYKRYQTK
KMRQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggtattcatgatgaaagatgttcaggaacaaacggcgctaaatccccttcatacctac
tggcgtctgtcagctgaatgcaatgtattgcatctgtccctgactggagaaaagaacgca
gaacaaaccattcatttatccccggaacaagccgaacgcatccgggaaatgacggagatg
acctccagcctgctgctgaccttgccgccagaaaaacaggctatctcactgcatctggta
ggccgcagaattaacaaacgagaatgggccggcagcctctcagcctgggctgatatgccc
gcagacccactaacgcaggtacaagaactctcttttgccgaacaaattgtttcagaggcc
agttcgctcattgtgatactgaataaccggggaaaaatttgtcggtttaatcggttatgt
gaggagtataccggcttaaaagagcaggatgtgatcggccaaagtgtctttacattattt
atgagtcgacgagaagctgccgcctcacggcgttaccacaatgatttttttcacaatggc
aacgcctatgaaatcgagcgctggattaaaacccgcaaaggccaacgcttgtttttattt
cgcaataaattcgttcatagcggtagtgggaaaaatgaaattttcttgatctgtgcaggt
acggatatcaccgaagagagacgaactcaggaacggttacgtatattggccaatacggat
accgtcaccggccttcccaatcgcaatgccatccatgaatttattaataatgctattgcc
tcgtcgggtgaatcacaagtcggtatcgtttatcttgacctggataacttcaaaaaaatc
aatgatgcgtatggccatatgtttggcgatcagctcttacaagccgtttcgctggcgctt
ctaagctgtctggaagaggatcagctgctggccagactgggcggcgatgaatttattgta
ctcgccacgcaaacatctcagggttcgctggaagcagttgcttcacgaattcttacccgc
ctgcggcaaccatttcgtatagggcttattgaagtttatacggggtgcaccattggcatc
tcgctggccccccagcatggacaggatagcgatagcattattcgtaatgccgataccgcg
atgtacaacgcgaaagaaggcggccgcggccaattctgcgttttttcaccagaaatgaat
cagcgtgtatttgactaccactggctgaacacgcacctgcgcgaagcgctggaaaatgac
catttactgatccattaccagccgaaaattacctggcgtggtgaagtgcgaagtctggag
gcgctggtacgctggcaatcgccggagcgcggactcatcccgcctcgggagtttatctca
tacgccgaagagtcaggattaatcgttccactgggccgttgggtaatactggatgttgtc
cgccagatcgcgaaatggcgcaataaaggaattaatctacgggtagccgttaacttttcg
gcaagacaacttgccgaccagacgctttttaccgacctcaaacaggttttgcacgatctg
aattttgagtattgcccgatcgatgtcgagttaacggaaagctgcctgattgaaaacgac
gcgctggcgctgacggttatacagcaattcagccagctcggcgcccagattcatttggat
gatttcggcaccggctattcttcgctttcccaacttgcccgcttccctattgatgctgtt
aaacttgatcaagccttcgtcagagatattcataaacagtcgctatcgcaatcgctggtt
cgtgcgattgtcgcggtagcacaggcgctaaatttacaagtgatcgctgaaggggtagag
aatgctaaagaagatgctttcctgacgaaaaatggcatcaatgaacgacagggttttttg
tttgctaaacccatgcctgccgcttctttcgaacgctggtacaaacgttatcagacaaaa
aaaatgcgtcaatga
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