KEGG   Candidatus Tachikawaea gelatinosa: TGUWTKB_5270
Entry
TGUWTKB_5270      CDS       T03624                                 
Symbol
ribD
Name
(GenBank) bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sbw  Candidatus Tachikawaea gelatinosa
Pathway
sbw00740  Riboflavin metabolism
sbw01100  Metabolic pathways
sbw01110  Biosynthesis of secondary metabolites
sbw01240  Biosynthesis of cofactors
sbw02024  Quorum sensing
Module
sbw_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sbw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TGUWTKB_5270 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TGUWTKB_5270 (ribD)
Enzymes [BR:sbw01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TGUWTKB_5270 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TGUWTKB_5270 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BAP58753
UniProt: A0A090AJW8
LinkDB
Position
561420..562535
AA seq 371 aa
MDDFYMNRALQLAYRGIFTTDPNPNVGCVIVKNNHIVGEGWHRKAGDMHAEIYALINAGK
NSLNATAYITLEPCNHFGKTPPCCIELIKSGINRVVIATKDPNPLVSGKSLTYLQKHGIQ
TKVGTMANEAKKINCGFFKRMKTGFPWIQIKMASSIDGRTSLLSEKKCWITDSFSRSDVQ
KFRAQSSAILSSSATVMIDNPSLNVRWNELDTNTKVILKKEDVRQPIIIIIDSKNKVTSQ
YKIINQSSNNIWFIRKNIKREFLSLKKIKQILVPTKNENIDLLKMFLILGKKQINKILVE
SGPKLAGALIKQKLADEIILYMSPKIFGHENKELFYIPKLHKLSEALEYKFTDIQVLGND
LRLILTPKKNI
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggacgatttttatatgaatcgtgctttacaattagcatatcgcggtatttttacaaca
gatcctaatcctaatgtcggttgtgtaattgtaaaaaataatcatattgtaggagaggga
tggcatagaaaagcaggtgatatgcatgcagaaatatatgctttaataaatgctggaaaa
aattcattaaatgctacagcatacattacacttgaaccttgcaatcattttggaaaaacc
cccccatgttgtatagagttaataaaaagtggtattaatcgtgtagttattgctactaaa
gatccaaatcctttagtatctggaaaaagcttaacttatcttcaaaaacatggcattcaa
actaaagttggtactatggctaacgaagctaaaaaaatcaattgtggtttttttaaaaga
atgaaaacaggttttccttggatacaaataaagatggcatcatctattgatggtagaact
tctttattatcagaaaaaaaatgttggattacagattcattttcaagaagtgatgttcaa
aaatttagagcacaaagttcggctattcttagtagcagtgcaactgtgatgatagataat
ccatctcttaatgtgagatggaatgaattggatacgaacacaaaagtgattttaaaaaaa
gaagatgttcgtcaacctatcattatcattattgatagcaaaaataaagtaacatcacaa
tataaaataataaatcaatcgtctaataatatttggtttataagaaaaaatattaaacga
gaatttctttctttaaagaaaataaaacaaattcttgttccaacaaagaatgaaaatatt
gatttgttaaaaatgtttctaatattaggaaaaaaacaaataaataaaattttagtagaa
tctggaccaaaactagcaggtgctttaattaaacaaaaattagcagatgaaataatttta
tatatgtcacctaaaatttttggtcatgaaaataaggaattattttatattcctaagtta
cataaattatctgaagcattagaatataaatttactgatattcaagtattaggaaatgat
ttacgtttaatattaacaccaaaaaaaaatatttaa

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