Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_15040
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Entry
CA265_15040 CDS
T05546
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx00240
Pyrimidine metabolism
sbx01100
Metabolic pathways
sbx01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CA265_15040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbx02044
]
CA265_15040
Enzymes [BR:
sbx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
CA265_15040
Secretion system [BR:
sbx02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
CA265_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
NAD1
APOBEC2
XOO_2897-deam
SNAD4
APOBEC4_like
Motif
Other DBs
NCBI-ProteinID:
ARS40896
UniProt:
A0A1X9Z6M5
LinkDB
All DBs
Position
complement(3790059..3790517)
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AA seq
152 aa
AA seq
DB search
MTDKPSFDSIFMNLATDLAARSHCVRAHVGAVLTKDTRIISIGYNGPPAGTHNCDEEWPE
HGCARDSKGSCSLALHAEENAILYASKNGSKIEGCTLYTTLSPCIACARLILSSGIKLVY
YSKSYAAYKGLPSDEGVDFLRKFGVEVVLIES
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaccaagtttcgattcgatatttatgaaccttgccaccgatttggcagcc
cgttcgcattgcgtgcgtgcccatgtaggtgcagtactcacaaaagatacccgtattatt
tctattggttataatggtccgccagccggtacgcataactgtgatgaggaatggccagaa
catggctgtgcacgtgatagtaagggaagttgctctttggccttacatgctgaggaaaat
gcgatcctgtatgcttctaaaaatggatcgaagatagaaggctgtaccttatacaccacc
ttatcgccttgtattgcctgtgcccgtttgattctgtcgtcgggaattaaattggtgtat
tattctaaatcgtatgcggcttataaaggtttgcctagcgacgagggggtagatttttta
cggaagtttggtgttgaggtcgttttgattgaatcgtag
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