Shewanella carassii: TUM17387_21240
Help
Entry
TUM17387_21240 CDS
T07543
Symbol
psuG
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
scaa
Shewanella carassii
Pathway
scaa00240
Pyrimidine metabolism
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TUM17387_21240 (psuG)
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
TUM17387_21240 (psuG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
BCV66765
LinkDB
All DBs
Position
complement(2382111..2383028)
Genome browser
AA seq
305 aa
AA seq
DB search
MLKQYLDIHPEVQAALEQGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
AILKGRLKVGMSREEINYLGKAGEAVIKTSRRDIPFIVAKGADGATTVASTMILAAMAGI
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDLGLTREYLETQGVPV
VGFQTDKLPAFYTRESDFGVDYRLDQPVEVAAAMKAKWDMGLKGGMVIANPIPHEHALDK
ALIDGAIARAVAEMDEKGIGGKASTPFLLAKVAEITEGHSLTANIELVYSNAKLAAEIAR
EYVTR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagtatctggatattcatcctgaagttcaagcagccctggaacaaggcaag
ccggtggtcgcgttggaatcgaccattatttcccatggtatgccgtatccgcagaacgtt
gagacagcgctcaaggtggagcagatcatccgtgataacggcgctgtacccgcaaccatc
gccattctcaagggccgcctcaaagtgggcatgagccgggaagagatcaattacctgggc
aaggccggtgaagccgttatcaaaaccagtcgccgtgacattccctttattgttgccaaa
ggggcagacggtgccaccacagtagcttccaccatgatcctggcggcaatggccggtatt
aaggtgtttgcaaccggtggtatcggcggtgtacaccgcggcgctcagcaaactttcgat
atctctgctgatttgcaggagctggccaacacagatgtagctgtggtttgcgccggtgcc
aagtctattctggatctgggcctgacccgtgaatatctggaaacgcaaggcgtgcctgtc
gttggttttcaaactgataaactgccggctttctacacccgcgagagtgacttcggtgtc
gactatcgcttggatcagccggtagaagtggcggccgccatgaaggccaagtgggacatg
ggtcttaagggcgggatggtgattgccaacccaattccccatgagcatgcgttggataaa
gcactgatcgatggcgccatcgcccgcgcagtggctgaaatggatgagaaaggcataggc
ggcaaggcttcaacgccgttcctgttggccaaagttgccgaaattaccgaaggtcacagc
ctgactgccaacattgagctggtatacagcaatgccaagctggcggctgagattgcccgc
gagtatgtgacccgctaa
DBGET
integrated database retrieval system
