Shewanella carassii: TUM17387_34370
Help
Entry
TUM17387_34370 CDS
T07543
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
scaa
Shewanella carassii
Pathway
scaa00130
Ubiquinone and other terpenoid-quinone biosynthesis
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01240
Biosynthesis of cofactors
Module
scaa_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
TUM17387_34370 (ubiD)
Enzymes [BR:
scaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
TUM17387_34370 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
BCV68078
LinkDB
All DBs
Position
3910219..3911757
Genome browser
AA seq
512 aa
AA seq
DB search
MINAIVRAINAFGSGGYFHMSFKDLRSFIDHLESQGELKRISYPVDPYLEMTEIADRVLR
AGGPALLFENPKGKQMPVLVNLFGTPKRVAMALGKDDPMALRDVGELLAFLKEPEPPRGF
KDAIAKIPMFKQALNMPPKTVRNAPCQEVVLQGDQVDLTALPIQHCWPGDVAPLVTWGLT
ITKGPRQKRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKQQHPGEKYPVVVALGSD
PVTILGAVTPVPDAMSEYAFAGLLRGERTEVVKALSCDLEVPATSEIILEGYIDPEEMAV
EGPYGDHTGYYNETDSFPVFTVTHISHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPIL
RKQYPEIVDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDED
VNCRDWQDVIWAITTRMDPSRDTVMIDNTPIDYLDFASPVAGLGSKMGLDATNKWEGETN
REWGTPIVMDQEVKQRVDEIWEQLGIEDQATL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgctatagtgcgcgccattaatgcattcggcagcggaggctatttccacatg
agttttaaggatttacgcagttttatcgatcaccttgagagtcagggtgagctcaagcgt
atcagctatccggttgatccttatcttgaaatgaccgagatagccgaccgggtgctgcgc
gccggtggcccggccctgctgtttgaaaaccccaagggcaaacaaatgcctgtgctggtt
aacctcttcgggactccgaaacgggtcgccatggcactgggtaaagatgatcccatggcg
ctgcgagacgtgggcgaactgctggcgtttctcaaggagcccgagccccccaggggcttc
aaggatgctattgccaagatccccatgtttaagcaagcactgaacatgccgcccaaaaca
gtgcgtaacgccccttgccaagaggtggtgttgcaaggcgatcaggtcgacctgaccgcc
ctacccattcagcactgctggcccggcgatgttgcaccgctggtgacctggggtttgacc
atcaccaaggggccgagacagaaacgccagaatctggggatctaccgccaacaactgctg
ggcaagaacaagctaatcatgcgctggttgtcacacagaggcggcgcattggactttgcc
gactttaagcagcagcacccaggtgaaaaatatcccgtggtagtggcgctgggcagcgac
cctgtcaccatcctcggcgccgtcactccagtccccgatgccatgagtgaatatgctttt
gccggactgctgcgcggcgagcgcaccgaagtggtcaaggccttgagttgcgatctggaa
gtaccggccaccagcgaaatcattctcgaaggttatatcgatcccgaagagatggcggtg
gaaggcccctacggtgaccacacaggttactacaatgaaaccgacagcttccctgtgttt
accgtaactcatatcagccacagaaaagacgccatctaccacagcacctacacgggaagg
ccaccggatgaaccggccatgctcggggtagcactcaatgaggtcttcgttcctatcctg
cgcaagcagtacccggaaatcgttgacttctacctgcctccggaggggtgttcctaccgg
atggcggtgatctccatccgcaaacaatatcccggccatgccaagcgggtgatgatggga
gcctggtctttcctgcgtcagtttatgtataccaagtttattgtcatagtcgatgaagac
gtgaattgccgcgactggcaggacgttatctgggccataaccactcggatggatcccagc
cgcgacactgtgatgatagacaacacccccattgactatctggatttcgcttcgcccgtg
gcagggctgggatccaagatgggcctggatgccaccaataaatgggaaggtgaaaccaac
cgcgaatggggcacccccatagtgatggatcaagaggttaaacagcgagtggacgagatt
tgggaacagttgggcatagaagaccaagcgaccctttaa
DBGET
integrated database retrieval system
