Sphingomonas cannabina: LZK98_13940
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Entry
LZK98_13940 CDS
T08607
Name
(GenBank) GMC family oxidoreductase
KO
K06151
gluconate 2-dehydrogenase alpha chain [EC:
1.1.99.3
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00030
Pentose phosphate pathway
scab01100
Metabolic pathways
scab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
LZK98_13940
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.3 gluconate 2-dehydrogenase (acceptor)
LZK98_13940
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GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Pyr_redox_2
FAD_binding_3
NAD_binding_8
Pyr_redox
Thi4
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UIJ44172
LinkDB
All DBs
Position
complement(2906149..2907921)
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AA seq
590 aa
AA seq
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MATKLPPVDVVIVGSGWTGGIVAKELAPTGLKVVMFERGRPQDTYPDFAGPQAHDALKYT
RRLHMVQDLSQETITFRNSMDQVALPIREHGFYWPGTNVGGSGAHWSGLTWRWLEWEHKM
RSGTIAKYGKGIVPEDMNLQDWPVSYDELEPYYDKFEKVCGISGKAGNIKGRKVPGGNPF
EAPRQNEYPTPPMTASHMMTLFDKATSNLGYHPFPIPTANCSQDYVNPDGIPLGQCHYCG
HCTAYGCEANAKASPHFLMLPLARKNTNFELRANATVVKVNLAADGKRATGVTYVDARGR
ELEQPADLVILGAFVTGNVHLMLHSGIGRPYDPKTNTGVVGRNYAFQGGGGAFILLDKDV
FTNPFMGSGALGSWIDDFNGDNYDFAKAGYIGGGGISLGNNSGDPLTYHPTMPGQPRWGR
GWKKAMVDAYQHVSAIGHQGAVMSYRQNYFDLDPTYRDAFGRPLLRLTFDWQENERKLMA
AHTAVCERIAAEITGRKQESAGTPRSFGRFNSARYQTTHNTGGVVFGDDPNTSALNKYCQ
SWDVPNVFVLGACVFPQNAGRNPTGPVGALAFWAADAITKKYLKRPGALV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagcttccgccggtggacgtcgtgatcgtcggttcgggctggaccggtggc
atcgtcgccaaggaactggcgccgaccggcctcaaggtcgtgatgttcgagcgcggccgg
ccgcaggacacctatccggatttcgcgggtccccaggcgcacgacgccctcaagtacacg
cgccgcctgcacatggtgcaggacctttcgcaggagaccatcaccttccgcaacagcatg
gaccaggtcgcgctgccgatccgcgagcacggcttctactggcccggcaccaatgtcggc
ggctcgggcgcgcactggtcggggctgacctggcgctggctggagtgggagcacaagatg
cgctccggcaccatcgccaaatatgggaagggcatcgttccggaggacatgaacctccag
gactggccggtctcctatgacgagctggagccctattacgacaagttcgagaaggtgtgc
ggcatctccggcaaggccgggaacatcaaggggcggaaggtgccgggcggcaatccgttc
gaggcgccgcgccagaacgaatatcctacgccgccgatgaccgcgtcgcacatgatgacg
ctgttcgacaaggcgacgagcaaccttggctatcatccattcccgatcccgacggcgaac
tgctcgcaggattatgtgaacccggacggcatcccgctcggccaatgccattattgcgga
cactgcaccgcctatggttgcgaggcgaatgcgaaggcgagcccgcatttcctgatgttg
ccgctggcgcgcaagaacacgaatttcgagctgcgcgccaatgcgacggtggtgaaggtc
aaccttgccgcggacggcaagcgggcgaccggtgtcacctatgtcgatgcgcgcgggcgc
gagctggagcagcccgccgacctcgtgatcctgggcgccttcgtcaccggcaacgtccac
ctcatgctgcattccggcatcggcaggccctatgatcccaagacgaataccggcgtcgtc
ggccgcaactacgcgttccagggcgggggcggagcgttcatcctgctggacaaggacgtg
ttcaccaaccccttcatgggatcgggggcgctcggcagctggatcgacgatttcaacggc
gacaattacgacttcgccaaggcaggctatatcggcggcggcggcatcagcctcggcaac
aacagcggcgatccgctgacctaccatccgaccatgcctggccagccgcgctggggcagg
ggatggaagaaggcgatggtcgacgcctatcagcacgtctcggcgatcggccaccagggt
gcggtgatgagctatcgccagaattacttcgatctcgatccgacctatcgcgacgccttc
ggccggccgctgctgcgcctgaccttcgactggcaggagaacgagcgcaagctgatggcc
gcgcacaccgcggtctgcgaacggatcgcggcggagatcaccgggcggaagcaagagagc
gccggtacgccgcgcagcttcggccgtttcaacagcgcccgctaccagaccacccacaat
acgggcggcgtggtgttcggcgacgatccgaacacgagcgcgctcaacaaatattgccag
tcgtgggacgtgccgaacgtcttcgtgctcggcgcctgcgtgttcccgcagaatgccggg
cgcaatccgaccgggccggtcggcgcgctcgccttctgggcggccgatgccatcacgaag
aaatatctgaagcgcccaggcgccttggtgtga
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