Sphingomonas cannabina: LZK98_14690
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Entry
LZK98_14690 CDS
T08607
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00052
Galactose metabolism
scab00511
Other glycan degradation
scab00600
Sphingolipid metabolism
scab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LZK98_14690
09103 Lipid metabolism
00600 Sphingolipid metabolism
LZK98_14690
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LZK98_14690
Enzymes [BR:
scab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LZK98_14690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
BetaGal_ABD2
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UIJ44306
LinkDB
All DBs
Position
complement(3080826..3083714)
Genome browser
AA seq
962 aa
AA seq
DB search
MDRRQLLLGSAGMGAMLSVRPVLAAPPRGMDDGFPMPPPIRSLPPRLPESDPSRTLLDLG
WRFHEGDIPMPEPVGHNATYLSVKAGNAPGAAAVVYDDSDWREVRLPHDWAASQPFVETA
NVSQGYRPRGIGWYRRTLRLDPADRGRTIELHFGGIATNATIWVNGSVVAHNWSGYNSVY
VDLTPFARFGDETNVIAVRVDADAKEGWWYEGAGLYRHVWLVRRAPVAIVSDGVHCDPRR
NADGWHVPVTVTLGNIENAPASVEVEAELIDPDGRSVAVQRVEASVPVLDRAEAVLRLNA
DAPRVWSVEEPTLYTVRTRVLREGRAVDERNIAIGFRTIRFDADKGLFVNDRPVKLKGVC
LHQDHAGVGVAVPDALLAWRLERLKAMGCNAIRMSHNAPNAELLDWCDRMGFLVMDENRN
FNPAPDYLAQLEWLVRRDRNHPSVILWSVFNEEPMQGTEAGVEMVRRMAAAVRRLDDSRP
ITAAMNGSFYNPANVSTVVDVMGFNYYQNDYDKFHRLNPTKPITSSEDTSAFETRGAFSS
DPARHVITSYDDEAASWGDTHRGSWRKIAERPFVAGGFVWTGFDYHGEPTPHEWPTISSF
FGILDLCGFPKTAFGIHSAHWIDDRPVLFLAPHWTWPGREGQAIRIFAIANAETIALSLN
GRELGVQQADRIMGNAWQVPYEGGRIEAVAMRGGKVVARASHETAGPPVALRLTPARTVM
AGDDEDVQPITIDAVDARGRHVPTANLMTRFVVEGGTIIGVGNGDPNSHEPEQGGSRSLF
NGLAQLIVRAGRGRGRIRITATAEGLKPATLALDRADIAPRPQVPVTPPVMSVREWRRSP
LLAARPEPTLAPSDDDNNSWAFVRSGTPTPAEPQAGWRVYRSRFTPWKRMAAAGGVIRFE
RIGGRAELWVDGQKLADKADTAPAPLEANLPPGAKPRVVVLVIEASAGAESGILGSVDVL
PR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatcgccgccagctccttctcggcagcgcgggaatgggggcgatgctttcggtccgg
ccggtgctggctgcgccgccgcgcgggatggacgacggcttccccatgccgccgccgatc
cggtccctgccgccgcgcctgccggagagcgacccttcgcgcacgctgctcgatctcggc
tggcgtttccacgaaggcgacatcccgatgcccgagccggtcgggcacaacgccacctat
ctcagcgtcaaggcgggtaacgcaccgggcgccgctgcggtcgtctatgacgacagcgat
tggcgggaggtccggctgccgcacgattgggccgcgtctcaaccctttgtcgagaccgcc
aatgtgtcgcagggctatcgcccgcgcggcatcggctggtaccggcggacgctccggctc
gatccggcggatcgcggcaggacgatcgagctgcatttcggcgggatcgcgacgaacgcg
acgatctgggtcaacggcagcgtcgtcgcccacaactggtcgggctacaacagcgtctat
gtcgatctgaccccgttcgcgcgcttcggtgacgagacgaacgtcatcgccgtgcgcgtg
gatgccgatgccaaggaaggctggtggtacgaaggtgccggcctataccgccatgtctgg
ctggtccgccgggcgccggtggcgatcgtgtcggacggggtgcattgcgatccacgccgc
aacgcagacggctggcatgtgccggtcaccgtcacactcgggaacatcgagaatgcgccg
gcttcggtggaggtcgaggcggaactgatcgatccggacggccgctcggtcgccgtgcag
cgggtcgaggcgagcgtgccggtgctcgaccgtgccgaggcggtgctgcggctcaatgcc
gatgcgccgcgggtctggtcggtcgaggagccgacgctctacacggtgcgcacgcgcgtg
ctgcgcgagggcagggcggtcgacgagcgcaacatcgcgatcggtttccgcacgatccgc
ttcgatgccgacaagggcctgttcgtcaacgatcgtccggtgaagctgaagggcgtctgc
ctccaccaggatcatgccggtgtcggcgtagcggtgccggacgcgctgctcgcgtggcgg
ctcgagcggctgaaggcgatgggctgcaacgcgatccgcatgtcgcacaacgcgcccaat
gcggagctgctcgactggtgcgaccggatgggcttcctcgtcatggacgagaaccgtaac
ttcaacccggcgcccgattatctcgcccagcttgaatggctggtgcggcgcgaccgcaat
catccgagcgtgatcctgtggtcggtgttcaacgaggagccgatgcagggcaccgaggcg
ggggtggagatggtccgccgcatggccgccgcggtacgccggctcgacgacagccggccg
atcacggcggcgatgaacgggtccttctacaacccggccaatgtctcgaccgtcgtcgat
gtgatggggttcaactattatcagaacgactatgacaagttccatcggctgaacccgacc
aagccgatcaccagctcggaggataccagcgccttcgagacgcgcggcgccttctccagc
gatccggcgcggcatgtgatcacctcctacgacgacgaggcggcatcctggggcgatacg
catcggggaagctggaggaagatcgccgagcggccgttcgtcgcgggcggcttcgtctgg
accgggttcgactatcacggcgagccgacgcctcacgaatggccgacgatctccagcttc
ttcggcatcctcgacctgtgcggctttcccaagacggccttcggcatccacagcgcgcat
tggatcgacgaccggccggtgctgttcctggcgccgcattggacctggccgggccgtgaa
gggcaggcgatccgcatcttcgcgatcgccaatgccgagacgatcgcgctcagcctcaac
ggtcgcgaactcggtgtgcagcaggccgaccggatcatgggcaacgcatggcaggtgcct
tacgaagggggacggatcgaggcagtggcgatgcggggcggcaaagtggtcgcgcgcgct
tctcacgagaccgcaggaccacctgtcgcgctgcgcctcacgcccgctcgaacggtgatg
gcgggcgacgacgaggatgtgcagccgatcacgatcgacgcggtcgatgccaggggccgt
catgtgccgacggcgaacctgatgacgcgcttcgtcgtcgagggcgggacgatcatcggc
gtcggcaacggcgaccccaacagccacgaacccgagcagggcggcagccggtcgctgttc
aacggcctcgcacagctcatcgtcagagcgggcaggggacgaggcaggatccggatcact
gccacggccgagggattgaagcccgcgacgctggcactcgaccgcgccgacattgcgccg
cggccgcaggtgccggtgacgccgccggtcatgtcggtccgcgaatggcggcgctccccc
ctgctggcggcccggccggagccgacgctcgccccctcggacgatgacaacaacagctgg
gccttcgtccgcagcggcacgccgacgcctgcagagccccaggcgggctggcgcgtctat
cgcagccggttcacgccctggaagcgcatggcggccgcgggtggagtgatccggttcgag
cgcatcggcggccgcgccgaactgtgggtcgacgggcagaagctcgccgacaaggccgat
accgcgccggcaccattggaggccaacctgccgccaggcgcgaagccgcgcgtcgtggtg
ctggtgatcgaggcgtcggcaggagcagagtcaggtatcctcggatcggtggacgtgctc
ccgcgctga
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