Stomoxys calcitrans (stable fly): 106096251
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Entry
106096251 CDS
T07664
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03020
RNA polymerase
scac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106096251
09124 Replication and repair
03420 Nucleotide excision repair
106096251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106096251
03400 DNA repair and recombination proteins [BR:
scac03400
]
106096251
Enzymes [BR:
scac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106096251
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106096251
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106096251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106096251
NCBI-ProteinID:
XP_013119355
UniProt:
A0A1I8NUN2
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNDDQLYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKSKIVEGQAPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGTRGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFKNLLKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKHDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGYFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELDSTTKRFTKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECK
GCKNKTQISQIRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgataatgatgaccaattgtacgaggaggagaatgctgaggagatttctcac
gaattgtggcaggaggcctgttggattgtgattaacgcctactttgatgagaaaggtctt
gtgcgacaacaattggacagtttcgatgagtttattcagatgtctgtacagcgtatagtg
gaagactcgccggctattgatttgcaagcagaggcccagcatacctcaggtgaaattgag
accccgccacgttttcttttgaaatttgaacaaatttatctctccaaacccacacattgg
gaaaaggatggctcgcctagtcctatgatgcccaacgaagcccgtttaagaaatttaact
tattccgccccattgtatgtggacattacaaaatcgaaaattgttgaaggccaagctccc
gtggagacacaacatcaaaagactttcattggcaaaattcccattatgttgcgctcaacc
tattgcttgctttctcagttaactgatcgtgatttaacagaattgaatgaatgccctttg
gatcctggtggctatttcatcattaacggttctgaaaaggtgttaattgctcaggagaaa
atggccacaaataccgtgtatgtcttcagcatgaaggatggcaaatatgcctacaaggct
gaaattcgttcttgtctggagcacagttcacgtcccacttctacactctgggttaatatg
atggctcgaggttcgcagaatatcaaaaaatcggctattggtcaacgtattattgccatt
ttgccatatatcaaacaggaaattcctataatgatagtattccgtgctttgggttttgtg
gcagatcgtgatattctggagcacattatttatgattttgatgatcccgaaatgatggaa
atggttaaaccctctttggatgaagcttttgtggtacaggaacaaaatgtcgccttgaat
ttcattggtacaagaggtgctcggcctggtgtgaccaaagacaagcgtattaaatacgct
aaggaaattttgcagaaagaaatgttgcctcatgtgggtgtttcagacttttgtgagaca
aagaaggcctatttcttgggttatatggtacatcgtctactattggcttctctgggtcgc
cgagaattggatgatcgggatcactacggtaacaaacgtttggatttggctggtcccttg
atggctttcttgtttagaggtttgttcaaaaatctcttgaaagaggttcgcatgtacact
cagaaattcattgatcgcggcaaagatttcaatttggaattggccattaagacaaatatc
atcactgatggtctacgttattccttggccactggcaattggggtgatcagaaaaaggcc
catcaggctcgtgctggtgtgtctcaggtattgaatcgtttaactttcgcctccacattg
tcacatttgcgtcgtgtcaactcgcccattggtcgtgacggtaaattggccaaacctcgt
caattgcacaatactttgtggggtatgttatgtcctgccgaaaccccagagggagctgct
gtcggccttgtaaagaatctggctcttatggcctatatctctgtcggttcacaaccctca
cctatattggagttcttggaagaatggtctatggaaaatttggaagaaattgccccatct
gccattgcagatgccaccaagatatttgtcaatggctgttgggtgggcatacatcgcgat
cccgaacaattgatggctactttgagaaaattgagaagacagatggatatcattgtctcg
gaggtgtctatgattcgagatattcgtgatcgtgaaattcgtatatacactgatgctgga
cgcatttgtcgccctctgcttatcgtagagaatggctccttgctacttaagaaaactcat
gttgaaatgttaaaggaacgtgactacaataactacagttggcaagtgttggtggcttct
ggtgtagtggaatatattgataccttggaggaggaaactgttatgattgccatgtcgccc
tatgatttgaagcacgacaaggattatgcctattgtaccacatatacgcattgtgaaatt
cacccagccatgatattgggtgtttgtgcctccattattcccttccctgatcacaaccag
tcgccccgtaatacctatcaaagtgctatgggtaagcaagctatgggtgtttatatcacc
aatttccacgtacggatggacactttggctcacgttttatactatcccatgaaacccttg
gtcaccacacgttccatggaatacttgcgtttcagagaattgcctgccggcattaactcc
attgtagccattctctgctataccggttacaaccaggaagattctgtcattttgaatgct
tcagctgtcgaaaggggttatttccgttctgtgttctaccgttcttataaggattcagaa
aacaaacgcattggtgaccaagaagagaactttgagaaacccaatcgccaaacctgccag
ggtatgcgtaatgctcactacgacaaattggatgatgatggtattattgctcccggcatt
cgtgtatccggcgacgatgtggttattggaaaaaccatgactttacccgaaaatgatgat
gaacttgatagcaccacgaaacgctttaccaaaagagatgcttccaccttcctgcgtaat
tctgaaactggtattgtggatcaagtcatgttgaccttgaacagtgagggctacaagttt
tgtaagattcgtgtgagatctgttcgtattccccaaattggtgataagtttgcttcacgt
cacggtcaaaagggtacttgcggtattcaataccgtcaagaggacatggcatttacctgt
gaagggttggctcccgatattatcattaaccctcacgctattccatctcgtatgacaatt
ggccatttaattgaatgcctccagggcaaactgggttccaacaagggagaaattggtgat
gctacacccttcaatgatgctgttaacgtacagaaaatttcaactttcctgcaagagtat
ggctatcatttgcgtggcaatgaggtcatgtacaatggacacactggacgtaaaattaat
gctcaagttttcttaggtcccacttattaccaacgtcttaagcacatggtggacgacaaa
attcactccagagcaagaggaccagtgcaaattcttgtaagacaacctatggagggcaga
gctcgtgatggtggtttgcgtttcggtgagatggaacgtgattgtcaaatatcccatggt
gcagcacaatttctgagagaacgtctgtttgaggtctcagatccctatcgtatacatgtt
tgtaatttctgtggcctaattgccatagccaatttgcgcaacaacacctttgaatgtaag
ggctgtaagaataagacacaaatatcccaaattcgtttgccgtatgctgctaaactcttg
ttccaagaactgatgtctatgaatattgcgccacgtttaatggtggtctaa
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integrated database retrieval system
