Streptomyces cadmiisoli: DN051_11760
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Entry
DN051_11760 CDS
T07301
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scad
Streptomyces cadmiisoli
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scad03009
]
DN051_11760 (rimO)
Enzymes [BR:
scad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DN051_11760 (rimO)
Ribosome biogenesis [BR:
scad03009
]
Prokaryotic type
ribosomal protein modification factors
DN051_11760 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AWW37232
UniProt:
A0A2Z4IWI5
LinkDB
All DBs
Position
complement(2812901..2814397)
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AA seq
498 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVQEASDADVAVVNTCGFVDAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
SGGGHAAHTPRDRRKLLPISPAERQESSAAVALPGHGPVDLPDGLAPASGPRAPLRRRLD
GAPVASVKLASGCDRRCTFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPDLAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRGKAPEAGVRSNFIVGFPGESEADLAELERFLN
SARLDAIGVFGYSDEEGTEAATYDNKLDEDVVADRLARVSRLAEELVSQRAEERVGQTLR
VLVESVDPEEGTYGRAAHQAPETDGQVLLTSGEGLSVGRMVEAKVVGTEGVDLVAEPLPG
AFAGVRAGGFPHSEEAGR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggttgggagctggtccaggaagcctcc
gacgcggacgtggccgtcgtcaacacgtgcggcttcgtcgacgccgcgaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggacacggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctcgcggaagccctcccggaagcc
gacggcgtcctgggcttcgacgactacgcggacatctccgaccggctccagaccatcctg
agcggcggcggccacgccgcgcacaccccgcgggaccggcgcaagctgctgccgatcagc
cccgcggagcgccaggagtcgtcggccgcggtcgccctgccggggcacggcccggtggac
ctgccggacggcctcgcccccgcctccgggccccgcgcgccgctgcggcgccggctggac
ggcgcgcccgtcgcctcggtcaagctcgcctcgggctgcgaccggcgctgcaccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgccccagcgacgtgctgaacgag
acgcgctggctcgccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacg
tcgtacggcaaggacctgggcgacatccggctgctggagtccctgctgccggacctggcc
gaggtcgacggcatcgagcgggtgcgcgtgagctacctccagccggccgagatgcgcccc
ggtctgatcgacgtgctgacctcgacgcccaaggtcgccccgtacttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggaactgctcgacaccatccgcggcaaggcgcccgaggcgggcgtccgctccaacttc
atcgtgggcttccccggcgagagcgaggccgacctggccgagctggagcggttcctcaac
agcgcgcgactggacgccatcggcgtcttcgggtactccgacgaggagggcaccgaagcc
gccacctacgacaacaagctcgacgaggacgtcgtcgcggaccggctggcgcgggtctcg
cgactggccgaggagctcgtctcgcagcgcgcggaggagcgcgtcggccagaccttgagg
gtcctcgtggagtccgtggacccggaggagggcacgtacggccgggcggcccaccaggct
ccggagaccgacggccaggtgctgctgacgagcggcgagggcctgagcgtcggtcgtatg
gtcgaggcgaaggtggtcggtacggaaggcgtcgacctggtggccgagccgctgccgggc
gcgttcgcaggcgtgcgcgcgggcggtttcccgcacagtgaggaggcgggcagatga
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