Streptomyces cadmiisoli: DN051_21125
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Entry
DN051_21125 CDS
T07301
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
scad
Streptomyces cadmiisoli
Pathway
scad00190
Oxidative phosphorylation
scad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DN051_21125
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN051_21125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scad03019
]
DN051_21125
Enzymes [BR:
scad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
DN051_21125
Messenger RNA biogenesis [BR:
scad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DN051_21125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AWW38846
UniProt:
A0A2Z4J1V4
LinkDB
All DBs
Position
complement(4879447..4881678)
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AA seq
743 aa
AA seq
DB search
MSQQNTQAEVKHAQPSVGSIAAHRPATVSATVSDLEPDLDADLDVYEETTVDGVQLPQGR
FLDRERSWLAFNERVLELAEDPNTPLLERANFLAIFASNLDEFFMVRVAGLKRRIATGVA
TRSASGLQPREVLEMIWARSRELMARHAACYHEDVAPALAEEGIHLVRWSELTEKEQARL
FTLFRHQIFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVSGHKHFARVKVPPLLSRFL
ESSPGRYVPIEDVIAAHLEELFPGMEVLEHHAFRLTRNEDLEVEEDDAENLLQALEKELM
RRRFGPPVRLEVEESIDREVLDLLVRELKISEAEVYPLPGPLDLTGLFRIHSLDRPELKY
PKFIAGTHRDLAEVESASAPDIFAALRARDVLLHHPYDSFSTSVQAFLEQAAQDPDVLAI
KQTLYRTSGDSPIVDALIEAAESGKQVLVLVEIKARFDEHANIKWARKLEEAGCHVVYGL
VGLKTHCKLSLVVRQEGDMLRRYCHVGTGNYHPKTARLYEDLGLLTADPQVGADLSDLFN
RLSGYSRRETYRRLLVAPKSLRDGLISRINKEAQHHRAGRPAYIRIKVNSMVDEAIIDAL
YRASMAGVPVDVWVRGICAIRPGVAGLSENIRVRSVLGRFLEHSRVFAFGNGGEPEVWIG
SADMMHRNLDRRIEALVRVVDPAHRAALNRLLETGMSDSTASWHLGPDGEWTRHATDADG
VPLRNIQEMLIDARRRRRGTATP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagaacacccaggcagaggtcaagcacgcgcagccctccgtgggctccata
gccgctcaccgcccggccacggtgtcggcgacggtctccgatctggaacccgacctcgac
gccgacctcgatgtgtacgaggagacgacggtcgatggcgtccagctgccgcagggccgg
ttcctcgaccgggaacgcagctggctcgcgttcaacgagcgcgttctggagctcgccgag
gacccgaacacgcccctgctggagcgggccaacttcctcgcgatcttcgccagcaacctg
gacgagttcttcatggtccgggtggccggtctgaagcgccgtatcgccaccggcgtcgcc
accaggtccgcctccgggctccagccccgtgaagtgctggagatgatctgggcccgctcc
cgcgagctgatggcccggcacgccgcctgctaccacgaggacgtcgcccccgccctcgcg
gaggagggcatccatctggtccgctggagcgagctgaccgagaaggagcaggcgcgcctg
ttcacgctgttccggcaccagatcttcccggtgctgaccccgctggccgtggaccccgcg
caccccttcccctacatctccggcctgtccctgaacctggccgtcgtcgtacgcaacccg
gtcagcggccacaagcacttcgcccgcgtcaaggtccccccgctgctctcccgcttcctg
gagagctccccgggccggtacgtccccatcgaggacgtcatcgccgcgcacctggaggag
ctgttcccgggcatggaggtgctggagcaccacgccttccggctgaccaggaacgaggac
ctggaggtcgaggaggacgacgcggagaacctgctccaggcactggagaaggaactcatg
cggcgccgcttcggcccgccggtgcgtctggaggtcgaggagtccatcgaccgcgaggtg
ctggacctgctggtccgcgagctgaagatcagcgaggccgaggtctacccgctgcccggc
cccctggacctcaccggcctcttccgcatccacagcctggaccggccggagctgaagtac
ccgaagttcatcgccggcacccaccgcgacctcgccgaggtcgagtccgcgtccgcgccg
gacatcttcgccgcgctgcgcgcccgcgacgtcctgctgcaccacccgtacgactcgttc
tccacatcggtgcaggccttcctggagcaggcggcccaggacccggacgtcctcgccatc
aagcagaccctgtaccggacctcgggggactcgccgatcgtggacgcgctgatagaggcg
gccgagtccggcaagcaggtcctcgtgctggtggagatcaaggcccgcttcgacgagcac
gccaacatcaaatgggcgcgcaagctggaggaagcgggctgccacgtggtctacggcctg
gtcggcctgaagacccactgcaagctctccctggtggtccgccaggagggcgacatgctg
cgccggtactgccacgtcggcaccggcaactaccacccgaagacggcccgcctgtacgag
gacctcggcctgctcaccgccgacccgcaggtcggcgccgacctgtccgacctgttcaac
cgcctgtcgggctactcccgccgcgagacctaccgccgtctgctggtcgcccccaagtcc
ctgcgggacggcctgatctcgcggatcaacaaggaggcccagcaccaccgtgcgggacgg
cccgcctacatccgcatcaaggtcaactcgatggtggacgaggcgatcatcgacgccctg
taccgggcgtccatggcgggcgtgcccgtcgacgtgtgggtgcgcggcatctgcgcgatc
cgccccggcgtggccggcctgtcggagaacatacgggtccgctcggtgctcggccgcttc
ctcgaacactcccgtgtgttcgccttcggcaacggcggcgagcccgaggtgtggatcggc
agcgccgacatgatgcaccgcaacctcgaccgccgtatcgaggccctcgtccgggtcgtc
gacccggcgcaccgagccgccttgaaccggctcctagagaccggcatgtccgactccacc
gcctcctggcacctgggcccggacggcgagtggacgcggcacgcgaccgacgcggacggc
gtgcccctgcggaacatccaggagatgctcatagacgcccggaggcgccggcgtggcaca
gcaacaccttga
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