Streptomyces californicus: I6J39_06870
Help
Entry
I6J39_06870 CDS
T07611
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
scal
Streptomyces californicus
Pathway
scal00240
Pyrimidine metabolism
scal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
I6J39_06870
Enzymes [BR:
scal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
I6J39_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QRV27065
LinkDB
All DBs
Position
1518008..1518943
Genome browser
AA seq
311 aa
AA seq
DB search
MSQNSPEPYEPVLSAEVRAALGAGRPVVALESTIIAHGLPRPRNLSVALELEGLVRSAGA
VPATVAVLDGRAHVGLGAEQLERVAADPSVRKLGHRDLAPALATGASGATTVSATAFLAA
RAGVGVFATGGLGGVHREWAVDQDESADLRLLARTGITVVCAGVKSILDVPATLQRLETL
GVGVLGYGTGRFPGFYLSSSGEPVDWTVHSPEEVVEVIRAKAALGGPPTALIVANPVPEE
EQLDPRLHDRVLAEALDACRERAVAGQAVTPFLLDQLMRRTDGASLEANLAAVRGNVALA
ARIAVAAAEPR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaactcgcccgaaccctatgagccggtgctctcggcggaggtgcgcgccgct
ctgggcgcgggacggcccgtcgtggcactggagtcgacgatcatcgcgcacggtctgccg
cgcccccgcaatctctccgtggccctggaactggaggggctcgtccggtccgccggggcc
gtccccgccaccgtggccgtgctcgacgggcgggcccatgtcggtctgggcgcggagcag
ttggagcgggtcgccgccgatccctcggtacgcaagctggggcaccgcgatctcgccccg
gcgctggccaccggggcgagcggtgcgacgacggtgtccgcgacggcgttcctggcggca
cgggcgggggtcggcgtcttcgcgacgggcgggctgggcggcgtccaccgggaatgggcc
gtggaccaggacgagtcggccgatctgcggctgctcgcccgcaccggcatcaccgtggtc
tgcgcgggggtgaagtcgatcctcgacgtcccggcgaccctccagcgcctggagaccctc
ggcgtcggcgtcctcgggtacggcaccgggcgcttccccggcttctatctgagcagctcc
ggcgagcccgtcgactggacggtgcacagccccgaggaggtggtggaggtgatccgggcg
aaggcggcgctgggcgggccgcccaccgcgctgatcgtcgccaaccccgtaccggaggag
gagcagttggatccccggctgcacgaccgggtgctggcggaggcgctggacgcgtgccgg
gagcgggccgtcgcggggcaggccgtgacgccgttcctgctcgaccagttgatgcggcgg
accgatggcgcgtccctggaggcgaacctcgcggcggttcgcgggaacgtggcgctcgcc
gcacggatcgcggtcgcggccgcggaacccaggtga
DBGET
integrated database retrieval system
