Streptomyces californicus: I6J39_27085
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Entry
I6J39_27085 CDS
T07611
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scal03009
]
I6J39_27085 (rimO)
Enzymes [BR:
scal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I6J39_27085 (rimO)
Ribosome biogenesis [BR:
scal03009
]
Prokaryotic type
ribosomal protein modification factors
I6J39_27085 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QRV30553
LinkDB
All DBs
Position
6193263..6194744
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQEAPAPVPEDLPEGVAPVSGPRAPL
RRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLQETRWLAEQGVKEVMLV
SENNTSYGKDLGDIRLLETLLPELADVDGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPY
FDLSFQHSAPGVLRAMRRFGDTDRFLELLDTIRSKAPEAGARSNFIVGFPGETEADLAEL
ERFLTGARLDAIGVFGYSDEEGTEAVGYENKLDADTIAERLAHISQLAEELTSQRAEERV
GETLQVLVESVESDEDGEVVVGRAAHQAPETDGQVVFTTREGLVPGRMVEAKAVGTEGVD
LVAEHHDLAEVAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagcttgcaggccgcttggcagcggacggctgggacctcgtcgaggacgcctcg
gacgcggatgtcgcagtcgtcaacacctgtgggttcgtcgaagccgccaagaaggactcc
gtcgacgccctgctcgaagcgaacgatctgaaggaccacggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggacctcgccgaggccctgccggaggcg
gacggcgtcctcggattcgacgactacgccgacatctccgaccggctccagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccgccgcaagctgctgccgatcagt
cccgccgagcggcaggacgccgccgtggcgctgcccggccacgcccaggaggcgcccgcc
ccggtccccgaggacctgccggagggggtcgctccggtctccgggccccgggcgccgctg
cgccgccgcctcggcaccagccccgtcgcctcggtgaagctcgcctcgggctgcgaccgc
cgctgctccttctgcgcgatcccctccttccgcggttcgttcatctcgcggcggccctcg
gacgtgctccaggagacccgctggctggccgagcagggcgtcaaggaggtcatgctcgtc
tccgagaacaacacctcctacggcaaggacctcggcgacatccggctgctggagaccctg
ctgcccgagctggccgacgtggacggcatcgagcggatccgggtcagctacctccagccc
gccgagatgcgccccggtctcatcgacgtcctcacctcgacgccgaaggtcgccccgtac
ttcgacctctccttccagcactccgcccccggcgtgctgcgcgcgatgcgccgcttcggc
gacaccgaccgcttcctggagctgctggacaccatccggagcaaggcccccgaggccggc
gcccgctcgaacttcatcgtcggcttccccggtgagaccgaggccgacctcgcggagctg
gaacgcttcctcaccggcgcccgcctcgacgcgatcggcgtcttcggctactccgacgag
gagggcaccgaagcggtgggctacgagaacaagctcgacgccgacaccatcgcggagcgc
ctcgcccacatctcccagctggccgaggagctgacctcgcagcgtgccgaggagcgcgtg
ggggagaccctccaggtgctggtggagtccgtggagtcggacgaggacggcgaggtcgtg
gtcgggcgcgcggcgcaccaggcgcccgaaacggacggccaggtggtcttcaccacacgc
gagggactggtgccgggccgtatggtcgaggcgaaggcagtgggcaccgagggcgtcgac
ctggtggccgaacaccacgaccttgcggaggtagccagatga
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