Struthio camelus australis (South African ostrich): 104139305
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Entry
104139305 CDS
T08512
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104139305 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104139305 (CLP1)
Enzymes [BR:
scam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104139305 (CLP1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104139305 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
MMR_HSR1
ATP_bind_1
AAA_22
AAA_16
CbiA
AAA_18
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104139305
NCBI-ProteinID:
XP_009665693
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGT
MGALYIERPADVEEGFSLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRAS
VSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKS
GGVVERSKDFRRECRDDRIREYFYSFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLG
MSQEDNQLKLVPVTPGRDMVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVL
SPAPRPLPKNFLLIMDIRFMDLK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcaggcggagcgcgaggacgagcgggggccccgcgtcatggtggtgggcccc
acggacgtgggcaagtcgaccgtgtgccgcctgctgctgaactacgccgtgcgcctgggg
cgccggcccacctttgtggagctggacgtgggccagggctccgtctccatccccggcacc
atgggggccctctacattgagcgccctgccgacgtggaggagggcttctccctgcaggcc
ccgctggtttatcacttcggctccaccacgcctggcaccaacatcaagctgtacaataag
atcacatcccgcctggcagacgtcttcaaccagcggtgtgaagtgaaccgccgagcgtcg
gtaagcggctgcgtcatcaacacgtgcggctgggtgaagggctcggggtaccaggcgctg
gtgcacgccgcctctgccttcgaggtggacgtggtggtggtgctggaccaagagcggctc
tacaacgagctgaagagggacctgccccactttgtgcgcacggtgctgctccccaaatcc
ggtggggtggtggagcgctccaaggacttccggcgggagtgccgagacgaccgcatcagg
gagtatttctacagcttccggggttgcttctacccccacgcctttgacgtcaagttctct
gacgtcaagatctacaaggtgggggctcccaccatcccggactcctgcctccccctgggc
atgtcgcaggaggacaaccagctcaagctggtgccggtgacgccggggcgggacatggtg
caccacctgctgagcgtcagcatggccgacagccccgacgacaacatctcggagacgagc
gtggccggcttcatcgtggtcaccggcgtggacctggagcgccaggtcttcaccgtgctg
tcgcctgcccctcgcccgctgcccaagaacttcctcctcatcatggacattcgcttcatg
gatctgaagtag
DBGET
integrated database retrieval system
