Struthio camelus australis (South African ostrich): 104141200
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Entry
104141200 CDS
T08512
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04010
MAPK signaling pathway
scam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104141200
04020 Calcium signaling pathway
104141200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104141200
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104141200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
104141200
NCBI-ProteinID:
XP_009668686
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
MIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNI
FDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVV
LYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFD
DDFEKLKEFRATEMKMYSLAVTPNGHVEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHT
FMDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKNQ
SGERESLLSGEGKGSTDDDSDDAKSSTVSRASLHRRAESLDYRSSLDLPELLQLPTMRHS
LSISPVAVLPAEYQDCNGKMVHVPSEFFLRIDSHKDDTLDYEDDMEDSYCYRIRKVLEPY
KPEWCKNHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPH
STERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIV
SMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFF
IIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYRWVRRKYNFDNLGQALMSLFVLS
SKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKC
RQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARKYIHTLCTSHYLDLFITFII
GVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLA
IVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALP
QVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRVSTG
DNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESN
KEAKEDAEMDAEIELEMSRGAATSATSRSRGGAAAPEGKVRSQETMKTESAVQAKHQALG
SAACLRPEDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMETYPCKSQR
GSITSIRSQPVGTCSSLRVPTESFQLAARSRNHEGRHRWKILSPHVAPRSPTLNKLLCRQ
EAVTTDSVDGKTPDTKYSLQAEPGETLPLAKQSQSTFPSSPLHPAAASLPPPPPHSPPCS
PHRHSSIPMRKHTFSQRSVASRPPSPTSSPPNPESGLLESSDPADEEVSHINSSAKDWGE
HSDAGSCSTSPFISPAPSPVPLKNCSTTSLSGGSSKGKDLKKFYSIDTKGFLAKPSWADN
QRRHSIEICPSVDDGDCSFEEAAEEKQRSPAHIQPESEYIHGARRKKKMSPPCISIDPPM
EDDGGAASPGCPFPKSESIPGAVRHNL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgatagccattctgatcaacacgctgagcatgggcatcgagtaccacgagcagccggac
gagttgaccaatgccttggagatcagtaacatcgtcttcaccagcatgtttgccctggag
atgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccatacaacatc
tttgatgggattattgttgtcatcagcgtctgggagatcatcggccagtcggatggaggc
ctctccgtgctacgaacttttcgactgctcagggtgctgaaactggtacgtttcatgccc
gccctccgtcgccagctggtggtcctgatgaagacaatggacaacgtagccactttctgc
atgttgctcatgctcttcatctttatcttcagcattcttggcatgcatctttttggatgc
aagttcagcctgaaaactgattcgggagacacagttccagatagaaagaatttcgactcc
ttgctttgggccattgtgacagtctttcagatcctcactcaagaggactggaatgtggtc
ctctacaatgggatggcttctacgtcctcctgggcagcgctctactttgtggccctgatg
accttcggcaattatgtgcttttcaaccttctcgttgccattctggtagaaggcttccaa
gcagagggtgatgccaataggtcagacacagatgaggacaagacatctgccaactttgat
gatgattttgagaagctgaaagaattccgagcaacagagatgaagatgtattcgctcgct
gtcaccccaaacggacacgtggagggcagggggagcatgccacctcctataattatgcgc
actgctgccacacctatgccaacgccgaagtgttccccacacatggattcggtgcacact
ttcatggactcaaggagagggagcaatgcttctctagaccccttgagctatgaccagaag
tccttgtctagcctccgcagttccccctgtgccaactgggggaccagcagcaactgggga
agccgacgctcaagctggaacagcctgggcagagccccgagcctcaagaagaagaaccag
tcaggagaaagagagtccttgctctccggggaggggaaaggcagcacggatgatgactct
gatgatgccaagtccagcacggtcagcagggcctcactgcaccgccgagcagagtccctg
gactatcgcagctccctggacctgcccgagctgctccagctgcctaccatgcgccactcg
ctcagtatcagccctgtggctgttctgcctgcggagtaccaagactgcaacggcaagatg
gtgcatgtccccagcgagttcttcctgcgcatcgacagccacaaggatgacacattggac
tacgaggatgacatggaggatagttactgctaccggattcgtaaagtcctagagccctac
aaaccagagtggtgcaagaatcacgaagactggtccctctacttgttttccccacagaat
cggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtagtgctg
gtcttcatatttctcaattgcatcactatagcactggagcgaccagacatagacccacac
agcacggaaaggatattcctaagtgtttccaattacattttcactgcaatctttgtggct
gaaatgatggttaaggtggtagctcttggcttcttctctggggagaacacctatctccag
agcagctggaatgtcctagatggagtcctggtctttgtatctatcattgacattattgtc
tccatggcatcggcaggcggagctaagatcctgggtgtccttcgagtgttgagacttctg
cggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggtagaa
accttgatctcctccttgaggcctattggaaatatcgttctcatctgctgtgctttcttc
attatctttgggattttaggggtgcagctttttaaaggcaaattctactactgtgatggt
cctgatgtgaaaaacatcactacaaagactgactgcactaatgcacgctacagatgggtt
cggaggaagtacaattttgacaatttgggacaggctctcatgtccttgtttgtcctctct
tccaaagacggctgggtgaacatcatgtacgatggtctggatgctgtgggtattgaccaa
cagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctcatc
gtcagcttcttcgtgctcaacatgtttgtgggggtggtagtggagaactttcacaagtgc
cggcagcaccaggaggcggaggaggcccggcgtcgggaggagaagcggctgagacgcttg
gagaaaaagcgcaggaaagcccagcgcaggccttactatgctgactattccccagcacga
aagtatattcacaccctctgcaccagccactatctggacctcttcatcacgttcatcatt
ggggtcaatgtcatcactatgtcaatggagcactacaaccagccgaagtccctggatgaa
gctctgaagtactgcaactatgtgttcaccatagtttttgtgttcgaggcagttttgaag
ttggtggcgtttggttttcgaaggttctttaaggacaggtggaatcagctggatttggcc
atagttcttttatcaattgtgggaatcacgctggaggagatcgagatgaatgctgcactg
cccatcaatcccacaataatacgcatcatgcgggtactgagaatagccagagtgctgaaa
ctgcttaaaatggccactgggatgcgagctctcctggacacagtggtgcaggcgcttccc
caggtagggaaccttggccttctttttatgctcctgttttttatctatgctgccctggga
gtggaattgtttggcaagctagattgcagtgaagaaaatccctgcgaaggtctgagccga
cacgcaactttcaccaacttcggcatggcctttctcaccctcttcagggtgtcaacaggg
gacaactggaatggtatcatgaaggacactctccgggaatgcacccgggaagacaagcac
tgcctcagttacctgcccgtcatctctcctgtctacttcgtcaccttcgtcctcatcgcg
cagtttgtcctggtcaacgtggtggtggcagtgctgatgaaacacttggaggagagcaac
aaggaggccaaggaggatgctgagatggatgctgagatcgagctggagatgtccagagga
gcagccacctcggccaccagcaggagcaggggaggtgccgcggccccagagggcaaggtc
agaagtcaggagaccatgaagacggagtcagcagtgcaggcgaagcatcaagcgctgggc
agtgcagcctgtctgcggccagaggactcccagaacctgctgacagtccgcaagatctcc
gtttcccggatgcactccttgcccaacgacagctatatgttccgccctgtgatgccagcg
aaagcccctttccccctccacgaagtggagatggagacctatccctgcaaatctcaaaga
ggatccatcacctccatccgctcccagcccgtgggaacgtgctcctctctgagagtccca
acagagtctttccaactggctgctcgttctcgcaaccatgaaggccgccaccggtggaag
atcctttccccgcatgtcgcccctcgatctcctactctcaacaagctgctgtgcagacag
gaggccgttacaacagactccgtggacgggaagactccggacaccaagtacagcctgcaa
gcggagcctggagagacactaccgttggcaaagcagtctcaaagcaccttcccttcaagc
ccactgcatcccgcggctgcctccctgccgccccccccgccgcactcccctccatgctcc
ccgcaccggcactccagcatccccatgcggaagcacaccttcagccagcgcagcgtcgcc
agccggccgcccagccccaccagcagcccgcccaaccccgagagcggcctcctcgagtcc
tccgacccggctgatgaggaggttagccacatcaacagctccgccaaagactggggtgag
cactcggacgccgggagctgctcgacttcgcccttcatctccccagccccatctccagtg
cccctcaagaactgcagcacaactagcctgtccgggggcagcagcaaagggaaggacttg
aagaagttttacagcatcgatacgaagggcttcctagctaagcccagctgggcagacaac
caaaggcggcactccatcgagatctgcccctccgttgacgatggagactgtagctttgaa
gaggctgcagaggaaaagcagcggtcgcctgcccacatccagccggagtcggagtacatc
cacggagcacggaggaagaagaagatgagcccgccctgcatttctatagatcctcccatg
gaggacgacggcggggcggcctcccccggatgcccgttccccaaatctgaatccatccca
ggtgcagttcgacacaacctttaa
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