Serinus canaria (common canary): 103818031
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Entry
103818031 CDS
T05755
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X2
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103818031 (HNF1A)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103818031 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
NanE
YebO
Motif
Other DBs
NCBI-GeneID:
103818031
NCBI-ProteinID:
XP_009090528
UniProt:
A0A8C9MKL9
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQRAINALQSEKGEPCPDI
PNGMGDSRASEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
GQGILTDEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAE
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPASGPPLTPH
SSSSLQPPPALSPSKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPS
QNLLSTDTKLVSAPGGTLPPVSTLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGAGET
PSLAPAFTNTGASTLVIGLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQ
VQSHINQSPFMATMAQIQNPHALYGPKSEVTQYTHAGLLPQTMVITDTANLSALTNLTPT
KQAFTPDSETHTDSGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQS
SDSTNSHSQLLPSTHNVIETFISTQMTSSSQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtctccaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggctctgagcgaagcggagccctacgggctgcagagc
gagagccagcgcgccatcaatgccctccagagcgagaaaggggagccctgccccgacatc
cccaacggaatgggggactccagggcatccgaagatgaaacctccgatgacggagaggaa
tttacccctccaataatgaaggagctggaaaacttgagccctgaggaggctgctcaccag
aaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaagatggtgaag
tcttacctccagcagcacaacatccctcagcgtgaggtggtggacaccacaggtctgaac
caatcccacctctcacaacacctcaacaagggcactcccatgaagacccaaaaaagggca
gccctgtacacctggtatgtccggaagcagcgagaggtggcccagcaattcacacatgct
ggccagggtatcctgacagatgagcccatgggagatgacctgcccaccaagaagggaagg
agaaaccgctttaagtggggtcctgcctcccaacagatcctgttccaagcctatgagagg
cagaaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaacagggcagag
tgtattcagagaggtgtttccccatctcaggcccagggactgggctcaaacctggtgaca
gaggtcagagtttacaactggtttgccaaccgcaggaaggaggaggctttccggcacaag
ctggccatggacaccttcagcggcccgcagcccgcctcgggcccgcctctcactccgcac
agctcctcctccctgcagccgccccccgctctctcacccagcaaggttcacggagtgagg
tacaaccagcagccagccagtgaggcagagtcctccagcagcaaccaccatgggaacagc
tccatggtgaccacccaaaccatcctgcatcaggtttctccccctggactggagcccagc
cagaacctgctaagcacagacactaagctggtatcagctcctggaggaactctccctcct
gtcagcaccctgactgccctgcacagcctggagcaaagcccacacacgctgagccagcag
acccagaacctgatcatggcatccctgccgggggtcatggccatcggggcgggcgagacg
ccgtccctggcgcccgccttcaccaacacgggagcctccacgctggtgatcggcctggcc
tcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctcactaccctg
cagcctgttcagttctcccagcaactgcacccatcctaccagcagcccctcatgcagcaa
gtccagagccacatcaaccagagccccttcatggctaccatggctcagatacagaaccct
cacgctctttatggccccaaatctgaagtgactcaatacacacatgcaggcctcttacca
caaaccatggtgataacagacacagccaatctcagcgccctgaccaacctgacacccact
aaacaggcattcacacctgactcagagacccacaccgactctgggatgcacacaccagtg
tcacaggcaccaacaatccatctacagaaccaagacacaacaatccagcaccttcagcca
ggcccacgcctcacctcgagccctgctgtgtcctccagcagcctggtgctgtaccaaagc
tctgactccaccaacagccacagccagctgctgccatccactcacaacgtcattgagacc
ttcatctccacacagatgacatcttccagccagtaa
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