Streptomyces scabiei: SCAB_30031
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Entry
SCAB_30031 CDS
T01187
Name
(GenBank) putative polyprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scb
Streptomyces scabiei
Pathway
scb00900
Terpenoid backbone biosynthesis
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
Module
scb_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SCAB_30031
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scb01006
]
SCAB_30031
Enzymes [BR:
scb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SCAB_30031
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SCAB_30031
2.5.1.29 geranylgeranyl diphosphate synthase
SCAB_30031
Prenyltransferases [BR:
scb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SCAB_30031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CBG70108
UniProt:
C9ZAB4
LinkDB
All DBs
Position
complement(3416298..3417527)
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AA seq
409 aa
AA seq
DB search
MGELPAGDGERAAGAQAIGALSVAGLLRPTGGRGRKRRGVLEQEGSGEPAGTVPPGGDRD
AEGRTDRGSPSGGREAAEILEQARVSVDPELRRAVGSLPRSMRRVARYHFGWEDADGTPA
AGNAGKAIRPALVLAAVHALGGRESVAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRATA
WTVFGVPDAILAGDAMQALAQRLLAEDPHPASAAAAARLASCVVELCEGQHTDTELEGRP
PLDVTLDEVLTMAEAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLIDDVI
GIWGDPSRTGKPAGADLMVRKKSLPVVAALASGTPEATELADLYGLPYAQGDLERTALAV
ERAGGREWAQVQAADRMARAVRELSRAVPDPESAGGLLALAEFVTRRSS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagttgccggcgggggacggggagcgggcggccggggcgcaggcgatcggcgcc
ctgagcgtggccgggctcctgcggcccacggggggccggggccggaagcggaggggcgtc
ctggagcaggaggggagcggggagccggcgggcaccgtgcctcccggcggagaccgggac
gcggagggccggacggaccgggggagtccgtcgggcggacgggaggcggcggagatcctg
gagcaggcccgggtgtccgtcgaccccgaactgcgccgcgccgtggggtccttgccccgc
tcgatgcgccgggtcgcgcgctaccacttcggctgggaggacgcggacggcaccccggcc
gccgggaacgcgggcaaggcgatacgcccggcgctggtgctcgccgccgtgcacgcgctc
ggcgggcgcgaatccgtcgccgtgcgggccgccgccgcggtggaactggtgcacaacttc
accctgctgcacgacgacgtgatggaccgggacaccacgcgtcggcaccgggccaccgcg
tggaccgtgttcggcgtgcccgacgcgatcctcgccggggacgcgatgcaggcgctcgcc
cagcgactgctcgccgaggacccgcatcccgcgtcggccgcggccgccgcgcggctcgcg
tcctgcgtcgtcgaactctgcgaggggcagcacacggacaccgagctggagggacgtccg
ccgctggacgtcaccctcgacgaggtgctcaccatggccgaggcgaagaccggtgcgctg
ctcggctgcgcctgcgcgatcggcgcactgtacgcgggcgcggccgaggaggacgtcgag
gctctcgacgcgttcgggcgggaggccgggctggccttccagctcatcgacgacgtgatc
ggcatctggggggatccgagccgtaccggcaagccggccggggcggacctcatggtccgc
aagaagtccctcccggtggtcgccgcgctcgcctccggcactccggaggccaccgaactc
gccgatctttacggactgccgtacgcgcagggagatctggagcgcaccgcgctggcggtg
gagcgggccggcggccgtgagtgggcacaggtccaggccgccgaccggatggcccgggcc
gtccgggaactgtcccgggcggtccccgacccggagtcggccggcgggctcctcgcactg
gccgagttcgtgacgcgacgcagcagctga
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