Streptomyces scabiei: SCAB_38941
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Entry
SCAB_38941 CDS
T01187
Symbol
lysS
Name
(GenBank) putative lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
scb
Streptomyces scabiei
Pathway
scb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCAB_38941 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scb01007
]
SCAB_38941 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scb03016
]
SCAB_38941 (lysS)
Enzymes [BR:
scb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SCAB_38941 (lysS)
Amino acid related enzymes [BR:
scb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SCAB_38941 (lysS)
Transfer RNA biogenesis [BR:
scb03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SCAB_38941 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
DZR
Motif
Other DBs
NCBI-ProteinID:
CBG70975
UniProt:
C9YZB2
LinkDB
All DBs
Position
complement(4366782..4368530)
Genome browser
AA seq
582 aa
AA seq
DB search
MPIVAQSTETTDWVSRFADEVIEESERRAPGKPVVVASGLSPSGPIHLGNLREVMTPHLV
ADEIRRRGHAVRHLISWDDYDRFRKVPNGIDGVDGSWAEHIGKPLTSVPAPPGSTHANWA
EHFKAAMVDALAEMGVEFDGISQTEQYTSGVYREQILHAMRHRGDIDAILDQYRTKKAPA
KKQQAQQKPVDEAELEAAEGSGAAGEDDGSSGGAGYFPYKPFCGSCGKDLTAVSAYDDDT
TELTYTCTACGFSETVALNEFNRGKLVWKVDWPMRWAYEGVVFEPSGVDHSSPGSSFQVG
GQIVGIFGGRQPIGPMYAFVGISGMAKMSSSKGGVPTPADALKIMEPQLLRWLYARRRPN
QSFKIAFDQEIQRLYDEWDKLDAKVADGSALPGDVAAHARAVGTAAGELPRTPRPMPYRT
LASVADITAGAEDQTLRILSELDPTDPLSGLDEVRPRLDRAEAWINTQVPADQRTVVRAE
ADGELLKSLDEPSRQSLRLLLDGLAEHWSLDGLTHLVYGVPKVQAGFPADATPKELPPEI
KTAQRTFFALLYHLLVGRDTGPRLPTLLLAVGQERVRSLLGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgtggctcagagcaccgagaccaccgactgggtctcccgtttcgcggatgag
gtcatcgaggagtcggagcgtcgggcccccggcaaaccggtcgtcgtcgcgtccgggctc
tctccctccggcccgatccacctcggcaacctccgcgaggtcatgaccccgcacctcgtc
gccgacgagatccgccgccgcggccacgcggtccggcacctgatctcctgggacgactac
gaccgcttccgcaaggtcccgaacggcatcgacggcgtcgacggctcctgggccgagcac
atcggcaagccgctcacctccgtgcccgccccgcccggctccacccacgccaactgggcc
gagcacttcaaggcggccatggtcgacgcgctcgccgagatgggcgtcgagttcgacggc
atcagccagaccgagcagtacacctccggcgtgtaccgcgagcagatcctgcacgccatg
cggcaccgcggggacatcgacgcgatcctcgaccagtaccgcaccaagaaggcgccggcg
aagaagcagcaggcgcagcagaagccggtggacgaggccgagctggaggccgccgagggc
tccggcgccgccggtgaggacgacggcagctccggcggcgccgggtacttcccgtacaag
cccttctgcgggagctgcggcaaggacctcaccgccgtcagcgcctacgacgacgacacc
accgagctgacctacacctgcaccgcctgcggcttctccgagaccgtcgcgctgaacgag
ttcaaccgcggcaagctggtctggaaggtcgactggccgatgcggtgggcgtacgagggc
gtcgtgttcgagccgagcggggtcgaccactcctcgccagggtccagcttccaggtcggc
ggccagatcgtcgggatcttcggcggccggcagcccatcgggccgatgtacgccttcgtg
ggcatcagcggcatggccaagatgtcgtcgtccaagggcggtgtgccgacccccgccgac
gcgctgaagatcatggagccgcagctcctgcgctggctctacgcccggcgccggcccaac
cagtcgttcaagatcgccttcgaccaggagatccagcggctctacgacgagtgggacaag
ctcgacgccaaggtcgcggacggctccgccctgcccggcgacgtggccgcccacgcgcgc
gcggtgggaaccgcggccggtgagctgccccgcacgccccgcccgatgccgtaccggacg
ctcgcgtccgtcgccgacatcaccgcgggcgccgaggaccagaccctgcgcatcctcagc
gaactcgaccccaccgacccgctgtccggcctcgacgaggtacggccgcggctggacagg
gccgaggcgtggatcaacacgcaggttcccgccgaccagcggaccgtcgtgcgcgcggag
gccgacggcgaactgctgaagtcgctcgacgagccgtcccggcagtcgctgcggctgctc
ctcgacgggctcgcagagcactggtccctcgacgggctcacgcacctcgtctacggcgtg
cccaaggtgcaggccggattcccggcggacgccacgcccaaggaactgcccccggagatc
aagacggcccagcggacgttcttcgccctgctgtaccacctgctcgtgggccgcgacacg
ggcccgcgcctgcccacgctgctgctggcggtggggcaggagcgggtgcggtccctgctg
ggggagtag
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