Streptomyces scabiei: SCAB_39031
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Entry
SCAB_39031 CDS
T01187
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
scb
Streptomyces scabiei
Pathway
scb00860
Porphyrin metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb01240
Biosynthesis of cofactors
Module
scb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
scb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
scb_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SCAB_39031 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scb04147
]
SCAB_39031 (hemB)
Enzymes [BR:
scb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SCAB_39031 (hemB)
Exosome [BR:
scb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SCAB_39031 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Mob_Pre
Motif
Other DBs
NCBI-ProteinID:
CBG70983
UniProt:
C9YZC0
LinkDB
All DBs
Position
complement(4377707..4378642)
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AA seq
311 aa
AA seq
DB search
MMRRMVAETRLHPADFILPAFVREGVSAPVPISAMPGVVQHTRDSLRKAAVEAVEAGVSG
IMLFGVPEDDKKDALGTPGTDPDGILQVAIRDVRAEVGDELLVMSDLCLDETTDHGHCGV
LDAEGRVDNDATLERYAEMAQVQADAGAHVVGPSGMMDGQIGVVRDALDQIGREDVAVLA
YTAKYASAFYGPFREAVASSLKGDRKTYQQDPANTRESLRELALDLEEGADMVMVKPAGP
YLDILARVADAVDVPVAAYQISGEYSMVEAAAEKGWIDRERAILETLTGIKRAGARNILT
YWAVEAARMLR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgatgcggcgcatggtggccgagacacggctgcatcccgcggacttcatcctgcccgcg
ttcgtgcgggagggcgtgagcgcgccggtgccgatctcggcgatgcccggggtcgtgcag
cacacgcgggacagtctgaggaaggccgccgtggaggccgtcgaggccggggtctccggg
atcatgctgttcggggtgccggaggacgacaagaaggacgcgctcggcacgccgggcacc
gatcccgacgggatcctgcaggtcgccatccgtgacgtgcgggccgaggtcggggacgag
ctgctcgtcatgtccgacctctgtctcgacgagaccaccgaccacgggcactgcggggtg
ctggacgcggaagggcgcgtcgacaacgacgcgaccctggagcggtacgccgagatggcc
caggtgcaggccgacgcgggtgcgcacgtggtcgggcccagcgggatgatggacggccag
atcggggtcgtccgggacgcgctcgaccagatcgggcgcgaggacgtcgccgtgctcgcc
tacaccgccaagtacgcctcggccttctacggacccttccgggaggcggtcgcctcctcg
ctgaagggggaccgcaagacctaccagcaggatccggcgaacacgcgggagtcgctgcgg
gagctggccctcgacctggaggagggcgcggacatggtgatggtcaagccggccggcccc
tacctcgacatcctcgcgcgggtcgcggacgccgtggacgtgccggtcgccgcgtaccag
atctccggtgagtactcgatggtcgaggccgccgccgagaaggggtggatcgaccgggag
cgggcgatcctggagacgctgaccgggatcaagcgggccggggcgcggaacatcctcacg
tactgggccgtcgaggcggcccggatgctgcgctga
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