Parasphaerochaeta coccoides: Spico_0088
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Entry
Spico_0088 CDS
T01469
Name
(GenBank) Protein of unknown function DUF2088
KO
K22373
lactate racemase [EC:
5.1.2.1
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00620
Pyruvate metabolism
scc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Spico_0088
Enzymes [BR:
scc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.1 lactate racemase
Spico_0088
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Gene cluster
GFIT
Motif
Pfam:
Lar_N
LarA_C
NNMT_PNMT_TEMT
Motif
Other DBs
NCBI-ProteinID:
AEC01330
UniProt:
F4GJ35
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Position
102778..104061
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AA seq
427 aa
AA seq
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MIEDMIHIQYVKKDIAVDIKKENLLGVFEPNAVDEPSDISEAIRNALFAPYGGPDFNGFL
EGAKTVLLVINDATRPTPSGTIIATLLPLLERYGITEKSGLGILIATGAHRGATDEEFGQ
LFGSLAARLKNCCISHDSQDVDELVNLGVTRNGTPIILNKRLFLFDRIIIIGSVEPHYFA
GFTGGRKAFLPGVAGYETIVANHRLALSEKAQSLALEGNPVHEDMMDALRHISAPVFSIM
SVLDKEQGIAAVTAGDITDSFHAAVDVAKKVFCVKIPRKADIVISVAKFPMDINLYQSQK
AIDNGAHAVKDGGILILVSACREGIGGKTFADLLARSSSPEDALERISREYKLGYHKAAK
MAAIMQRMTVFAVTNLDAGLQESLFLTPVGTVQEAITKAIGVMHDKGIDTPQVIVFPDGC
VTIPVEE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacatgatacacattcaatatgtgaagaaggacattgcggtcgatataaaa
aaggaaaatctcctgggggtgtttgagcctaatgctgtggatgagccgtcagatatctcc
gaggccatccgcaatgccttgttcgctccatacggaggaccggacttcaatgggttcctt
gaaggggcgaagacagtccttcttgtcatcaatgacgcgacacgccctacgccgtcagga
acgatcatcgcgacgcttcttcctctgctggaacggtatggcatcaccgagaaaagcggg
cttggcatacttattgccaccggtgcccatcggggagccacggatgaagaattcgggcag
ttgttcggttctttggccgcacgcctgaaaaactgttgtatatctcatgattcccaggat
gtggatgagcttgtgaatctgggggtcacgcgcaacggaacgcccatcattttgaacaaa
aggttgttcctgtttgacagaatcatcattatcggaagtgtcgagccacattatttcgcc
ggtttcacaggcggccgcaaggctttcctgcccggtgtcgccggatatgagaccatagtt
gcaaaccataggcttgcattgtctgaaaaagctcagtcgctggcattggaaggcaatcct
gtacatgaagatatgatggatgccctgcgccatatttccgcgcctgtgttttccatcatg
tctgttcttgataaggaacagggaattgcggctgtcacggcgggagacatcactgattca
ttccatgccgcggtggatgtcgccaaaaaggttttctgcgtgaagattccccggaaagcg
gacattgtcatatctgttgccaaatttcccatggacatcaatctgtatcagtcccagaaa
gcgattgacaatggagcgcatgcggtaaaagacggaggcatcctgattttggtatccgct
tgcagggaagggattgggggcaagacttttgctgatcttcttgcccgttcttcttctccg
gaagatgcgttggagaggataagtcgggaatacaagctgggttatcacaaggctgcaaag
atggctgccatcatgcagcggatgacggtttttgccgttacgaatctggatgccgggctt
caggaaagtctttttctgacaccggtcggcactgtccaggaagcaatcaccaaggcaatc
ggggtcatgcatgacaaaggcattgatacacctcaggtcattgtttttcctgatggctgc
gtgactatccctgtggaagaataa
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