Parasphaerochaeta coccoides: Spico_1489
Help
Entry
Spico_1489 CDS
T01469
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spico_1489
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scc01007
]
Spico_1489
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scc03016
]
Spico_1489
Enzymes [BR:
scc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Spico_1489
Amino acid related enzymes [BR:
scc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Spico_1489
Transfer RNA biogenesis [BR:
scc03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spico_1489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
Anticodon_2
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AEC02692
UniProt:
F4GIS4
LinkDB
All DBs
Position
complement(1758257..1759849)
Genome browser
AA seq
530 aa
AA seq
DB search
MNGFPAILRPMSEMHWADVYAAKIVREKGPKDRYTCASGITPSGTVHIGNFREIISVDLV
VRALRSQGHDVRFIYSWDDYDVFRKVPKNMPQPDLLKTYLRKPITLVPDTTGRADNYARS
NELDVEEALPWVGIEPEYIYQASRYRASNYAREIRLTLEHRDELRQILDEFRTEPLPADW
WPVSIFSGFTGKDMTTVLDWDGEWGLTYRDDETQQVETIDLRETALAKLPWRLDWPMRWA
REQVDFEPAGKDHHSEGGSFDTSRKVVKVYGAEAPVSFQYDFISIKGRGGKISSSTGEVI
SLPDVLEVYLPEVTRYLFASTRPNTEFSISFDLDVLKIYEDYDTCERIYFGLQSANDKRR
AKEKRIYELSQVGEVPSEAGYQIPFRHLCNLLQIHVGDIEAVLDMLPGITEGQKERLRAR
AVCAWKWITTFSPEEFRWTLAAGTSPLVELSDVERKAIHDLRALVENLDNLDDKDFTQRL
YDVAKDNGLETPDFFKMVYMVLIGGERGPKLAGFIRNCGKERILPILGRY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggcttccccgctatactgcggcctatgagcgaaatgcattgggcggacgtatat
gccgcgaagattgtcagggaaaaaggaccgaaggacagatatacctgtgcatcagggatt
actccgtctgggacggttcatatcggtaatttcagggagattatctccgtcgacctcgtg
gtacgcgccttgcgttcccaaggacatgatgtccgtttcatatattcatgggacgactat
gacgtcttccgcaaggttcccaaaaacatgccgcaaccggacttgctgaaaacctatctc
cgcaaacccataaccttggttcctgatactacaggccgtgccgacaactatgcccgttcc
aatgaactggatgtcgaggaagcgttgccatgggttggcatagagccggagtacatctac
caagcctcacggtaccgcgccagcaattacgccagagaaatccgcctgacattggagcat
cgtgatgagttgcgccagatcttggacgaatttcggacagaaccgcttcctgcggactgg
tggccggtttccattttcagtggtttcacgggaaaggacatgactaccgtgctggactgg
gacggagagtggggactgacgtatcgtgatgacgagacgcaacaggtcgagactatcgac
ctgagggagacggctttagccaaactcccctggcggcttgactggcctatgcgatgggcg
cgtgaacaggtggatttcgaacctgcgggcaaggatcaccatagcgaaggcggttccttt
gataccagccggaaagtggtgaaggtttatggtgccgaggctcccgtatccttccaatat
gatttcatcagcataaaagggcggggagggaagatatcatcgtccacgggagaagtcatc
agtcttcctgatgtcctggaagtctatttgccagaagtgacccggtacttgttcgccagc
acacggccgaacactgaattttccatatcctttgatttggatgtcctgaaaatctatgaa
gattatgacacctgcgaacgtatctatttcggtttgcagtcggccaacgacaagcggcgt
gccaaggaaaaacgtatttacgaactgagccaggtcggggaagtgccgtccgaggcaggc
taccagataccgttccgtcatctttgcaacctattgcagattcacgttggggacattgag
gcggtacttgatatgttgcctggcattaccgaaggccagaaggaaaggttgcgtgcccgt
gccgtctgcgcatggaagtggattaccaccttcagcccggaggaattccgctggacgctt
gctgccggaacatcccccttggtcgaattatcagatgtggaacgcaaggccatccacgac
ttgcgcgcattggtagagaatcttgataatctggatgataaggattttacacagcgactc
tacgatgtggcaaaagacaatggtctggaaacgccggatttctttaagatggtctacatg
gttctgattggcggcgaacgtggtcccaagctggcaggattcatccgtaactgcggcaag
gaaaggatacttcctatcctgggaaggtattga
DBGET
integrated database retrieval system
