Gracilinema caldarium: Spica_0178
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Entry
Spica_0178 CDS
T01573
Name
(GenBank) Tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
scd
Gracilinema caldarium
Pathway
scd00260
Glycine, serine and threonine metabolism
scd00400
Phenylalanine, tyrosine and tryptophan biosynthesis
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spica_0178
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Spica_0178
Enzymes [BR:
scd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Spica_0178
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
AEJ18346
UniProt:
F8EWW0
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Position
201771..202583
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AA seq
270 aa
AA seq
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MQPITLMAHLVANYPDPSGCLAAAEALVEAGTRYLEVQIPFSDPSADGRSIMNACAATLE
AGFSVADAFHLVQELKGRYPQIPLFVMAYANLVVSPGVDAFVHRLHQAGVSGLIVPDLPF
DRDEGLAAACAAYTEPVISAIPVAAPSMSRERLINMVSLGRPYLYAALRTGITGQATEIA
DSTKEFLALCGSGGSKVLGGFGIRSHAQALQVADHVHAVVAGSVFVDAISKAVEAHGVVR
NGSFRGSSRVRDEAIRNLVREQVLEIIQGA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgattactcttatggcccatctggtggccaattatccagacccttcgggctgt
cttgcagcagccgaagccctggtagaggctggtacgaggtatcttgaggtgcagattccc
ttcagtgatcccagtgcggatgggcgaagcattatgaatgcctgtgcggcaacgctggag
gcgggtttttcggtcgccgatgcgttccacctggttcaggagcttaaggggcgctatcct
cagattcctctttttgttatggcctatgctaaccttgtggtaagtcccggtgtggatgcc
tttgtgcaccggctgcatcaggccggagtatccgggctcattgtgccggaccttcccttt
gatagggatgaggggcttgcggcagcctgtgccgcctatactgagccggtcatttctgcg
atccctgtggctgccccctctatgagccgggagcggctcatcaatatggtatccctgggt
cgtccctatctatatgcggcactccgtacggggattaccggtcaggcaacggaaattgca
gacagtacgaaggaattccttgccctctgcgggagtggcggttcaaaggtgttagggggc
tttggaattcgcagtcatgcccaggctttgcaggtagcagaccatgtgcatgctgtggtg
gccggttctgtctttgtggatgccatctccaaggcggtggaagcccatggtgtggtgcgg
aatggcagtttccggggctcaagccgggtccgtgatgaggcaatacggaacctggtgcgg
gaacaggtcctggaaattattcagggagcatag
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