Gracilinema caldarium: Spica_0473
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Entry
Spica_0473 CDS
T01573
Name
(GenBank) quorum-sensing autoinducer 2 (AI-2), LuxS
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
scd
Gracilinema caldarium
Pathway
scd00270
Cysteine and methionine metabolism
scd01100
Metabolic pathways
scd01230
Biosynthesis of amino acids
scd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Spica_0473
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_0473
Enzymes [BR:
scd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
Spica_0473
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Gene cluster
GFIT
Motif
Pfam:
LuxS
Motif
Other DBs
NCBI-ProteinID:
AEJ18637
UniProt:
F8EYR0
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All DBs
Position
complement(525607..526083)
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AA seq
158 aa
AA seq
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MKKIASFTVDHIRMKRGIFVSRKDRFGNTVLTTFDIRMKEPNREPVLDVPTSHTIEHLGA
TFLRSHPQWGSRIVYFGPMGCRTGFYVILEGNLSSLDVLSVITEMYQWIASYVDEIPGAS
AAECGNWRDHNLDMARWEALRFLDVLKHPLSENLEYPS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagccagctttaccgtagatcatatccgtatgaaacggggtatctttgta
tcccggaaagatcgcttcggtaacacagttctcaccacctttgacattcgtatgaaagaa
cccaaccgtgaacccgtattagatgtccccacatcccacactatagaacacttgggcgcc
acctttcttcgatcccatccccaatggggaagccggattgtttattttggccccatgggc
tgcagaaccggcttctatgtcatcctcgaagggaatctttcatccctcgatgtcttgtct
gtcataaccgagatgtaccaatggattgcgtcatatgttgatgaaattccgggggcgtcg
gcggctgaatgtggcaactggcgagaccataatctggatatggcacggtgggaggcgctc
cgtttcctggatgtgctcaaacatcccttatcggaaaacctagagtacccgtcataa
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