Gracilinema caldarium: Spica_1542
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Entry
Spica_1542 CDS
T01573
Name
(GenBank) Pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
scd
Gracilinema caldarium
Pathway
scd00240
Pyrimidine metabolism
scd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Spica_1542
Enzymes [BR:
scd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Spica_1542
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AEJ19686
UniProt:
F8EZ94
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All DBs
Position
complement(1738032..1738982)
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AA seq
316 aa
AA seq
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MKTKDATANYLVLSEEVASAISGGKPVVALESTIISHGMPYPKNVETALQVEAQVRSYGA
IPATIAIMDGKLKAGLTTDEIEFLGKKGQEVIKCSRRDIPFVLAKKETGATTVAATMIVA
EMAGIQVFATGGIGGVHRFAQETFDISADLEELAQTSVAVVCAGAKSILDLGLTLEYLET
RGVPVIGYQTRELPAFYCRTSGFSVDYRLDTPQEIAEVLNLKWKTGLAGGVVIANPIPEV
YALPKSEIDRVIEQALTEARQRGIKGKETTPFLLAKIVELSGGKSLEANIQLVLNNAALA
GQIAASLGSLNIKEVY
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaaggatgcaactgcaaactatcttgtattatctgaagaggttgcttcggcc
atatccggtggcaaaccggtggttgccctggaatctaccattattagccatggtatgccc
tatccaaagaacgtagagactgccctgcaggtagaagcccaggtccgctcttatggggcc
attccagccaccattgccattatggacggcaaactaaaggcggggctgaccaccgatgaa
attgagtttctaggtaaaaaaggccaggaagtgattaaatgcagccgacgggatatcccc
tttgtactcgctaaaaaagaaaccggcgctaccaccgtagcggctaccatgattgtggca
gaaatggcaggtattcaggtctttgcaaccggcggtattgggggtgtccatcgcttcgcc
caggaaacctttgatatttctgcggatctggaagaattagcccaaaccagtgtggctgtt
gtctgtgcaggtgcaaaaagcatcctcgatctgggccttactctggaataccttgaaacc
cgtggtgtacctgtcatcggctaccagaccagagaacttcctgccttctactgtagaaca
tcgggcttttctgtagattaccggcttgatacacctcaggaaattgctgaggttttaaat
ctgaaatggaaaaccgggcttgccggcggtgtggttattgccaatccaatacccgaagtc
tatgcacttcccaagtcagaaatcgaccgggtcattgaacaagccctcaccgaagctcgt
cagcgggggattaaaggaaaagaaactaccccctttttgctggctaaaattgtggaactc
tccggtggtaaaagcctcgaagccaatatacaattagtattgaacaatgcagcccttgct
ggccagattgcggccagtttaggttctcttaatattaaggaggtttattga
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