Gracilinema caldarium: Spica_2042
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Entry
Spica_2042 CDS
T01573
Name
(GenBank) Biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
scd
Gracilinema caldarium
Pathway
scd00061
Fatty acid biosynthesis
scd00620
Pyruvate metabolism
scd00640
Propanoate metabolism
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01120
Microbial metabolism in diverse environments
scd01200
Carbon metabolism
scd01212
Fatty acid metabolism
Module
scd_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Spica_2042
00640 Propanoate metabolism
Spica_2042
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spica_2042
Enzymes [BR:
scd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
Spica_2042
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
Spica_2042
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_5
ATPgrasp_ST
Oxidored_nitro
DUF3182
TTL
Motif
Other DBs
NCBI-ProteinID:
AEJ20169
UniProt:
F8EZE6
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Position
2290952..2292283
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AA seq
443 aa
AA seq
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MIKRLLIANRGEIAVRVIRTCREMGIETVAVYSTADKENLHVKLADQAVCIGPPPSAKSY
LVKENLIMAALRTGCQAIHPGVGFLSENADFARAVQKEGLIFIGPDPDVIDLLGDKVQAR
NTAKKYGLPITPGTEGAVSDPQAAVAAAEKLGFPVIIKAAAGGGGKGMRIVRSAAELPEN
LAIASREALANFADGTVFIERYLENPRHVELQIIADGNGTVLVLGERDCSVQKRHQKLIE
ESPSPGVDDDMRRRMAEGAVRMFRELKYRGAGTIEFLVSGKEFYFMEVNARIQVEHPVSE
FVTGVDIIRQQILACTEGRLEIAPDSVHLHGWSIECRINALSPGKVTRLDVPGGPGVRFD
SFLYNGCTVPPHYDAMVAKLIVHGPTRERALARMNRALQELVIEGIKTNTAQQRWIINHT
TFRSGQFGTAYYGEIEKEVEHVH
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaacgtctacttattgcaaaccggggagaaattgctgtccgggtcatccgaact
tgccgggaaatgggaatagagaccgttgcggtctattctacggcagacaaggaaaatctc
catgtaaagcttgctgaccaggcagtgtgcatagggccgccgccatcggcaaaaagctac
ctggttaaggaaaacctcattatggcagcacttcgcacaggatgtcaggccatacacccc
ggtgtagggttcctgtcggagaatgccgattttgcccgggcggtgcagaaagaggggctc
atctttatcggccccgatccggatgtaattgatctactgggggataaggtccaggcccgc
aatacggcaaaaaaatatggactccccataacgcctgggaccgaaggagccgtttcagac
cctcaggctgcagtcgctgcagcagaaaagctcggcttcccagttattattaaggcagcc
gcagggggtggcggcaaggggatgcgtattgtccgatcagctgcggaactgccggaaaat
ctggccattgcaagccgggaagccctggcaaattttgcagatggcacggtctttattgaa
cgataccttgaaaacccccgacatgtagaactccagattatcgccgatggtaacggtact
gtgcttgtcctaggcgaacgagactgttcagtacagaaacgacatcagaaattgatagaa
gagagtccttctccaggggtcgatgacgacatgcgccggcgtatggccgaaggggctgtg
cgcatgttcagagagttaaaataccgcggagcggggactatcgaatttctcgtatccggc
aaagaattctattttatggaagtaaacgcccgcattcaggtagaacatccggtcagtgaa
tttgttaccggcgtagatatcattcgccagcagattctggcctgtaccgaaggccgtttg
gaaattgccccggattcagtgcacttacatggctggtccattgagtgccgcatcaacgca
ttaagccctggtaaggttacccgtctggatgtccctggtggacccggtgtccgcttcgat
tcgttcctgtataacggctgtaccgttccaccccactatgacgctatggtagcaaaactc
atcgttcacgggccgacccgcgaacgggctctcgcccgtatgaatcgggcgctccaggaa
ttagttatagagggtattaaaaccaacactgcccagcaacggtggatcatcaatcataca
acctttcgttcggggcaatttggtacggcctactatggtgaaatagaaaaggaggtggaa
catgtccactga
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