Gracilinema caldarium: Spica_2517
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Entry
Spica_2517 CDS
T01573
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
scd
Gracilinema caldarium
Pathway
scd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spica_2517
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scd01007
]
Spica_2517
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scd03016
]
Spica_2517
Enzymes [BR:
scd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Spica_2517
Amino acid related enzymes [BR:
scd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Spica_2517
Transfer RNA biogenesis [BR:
scd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spica_2517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
AEJ20621
UniProt:
F8F4H4
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Position
2839030..2840613
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AA seq
527 aa
AA seq
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MDTKNIHWADQTAEKIIREKGDKDLYTCASGITPSGTVHIGNFREIISVDLVVRALRDRG
KKVRFIYSWDDYDVFRKVPLNMPKQDMLAQYLRFPITMVPDPWERDESYARHHEVDVESI
LPEVGIFPEFLYQAKRYRSSMYAEGIRKALEHRDLLKNILDKYRDEEHKIQGEWWPISVF
CDSCNRDTTEIDGWDGQWGVTYHCTTCNHKETVDLRTAKGVKLGWRVDWPMRWEFEKVDF
EPAGKDHHSQGGSFDTAKHVCKDVYGWEAPITFRYDFIGIKGTPGKMSSSKGKVVDLYDI
LRVYTPEVTRYLFAGTRPNTEFVISFDLDVIKIYEDYDKTERIAWGVEKAKDEETYLKER
RIYELSQVNGMPNMMPYQVPFRHLCNLIQIADGNIDKVIAGLPDIKEEQIPAFRKRCECA
WYWIRECAPEDFRFHLRPAGERAELTDAETAAVRDLRDQVVARIETFADDKTCGEAIYAV
ANEHQMDGKVLFRAAYQALIGKDQGPRLANFLRNIDKNRLLEILKAY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaagaatatacattgggctgaccaaaccgcggaaaaaattatccgcgagaaa
ggtgataaggatttgtacacctgtgcttccgggattaccccctcaggtacggtacatatt
ggtaattttcgggaaattatctcggtagatctggtcgttcgggctttacgggatcggggc
aagaaggtccgctttatctactcctgggacgattacgatgtattccgcaaggttcctctg
aacatgccaaagcaggatatgcttgcccaatacctgcgctttcccattaccatggtaccc
gacccctgggagcgggatgaaagctatgcccggcaccatgaggtagatgtagaatcaatc
ctgcctgaggtaggtattttccctgaatttttatatcaggcaaaacgataccgatcatcc
atgtatgcggaagggatccgtaaagctctggaacaccgggatcttcttaaaaatatcctg
gataagtaccgggatgaggaacacaagattcagggcgaatggtggcccatcagtgtattc
tgtgattcctgtaaccgggataccaccgaaattgatggctgggacggccagtggggagtt
acctaccattgcaccacctgcaaccacaaggaaacagtggacctccgaacagccaagggt
gttaagcttggctggcgggtcgactggcccatgcggtgggaatttgaaaaggttgatttt
gaaccggccggtaaggaccaccacagtcagggcggctcctttgacacggcaaaacatgtc
tgcaaggacgtctatggctgggaagcccccatcaccttccgctatgactttatcggtatt
aagggaacaccgggtaaaatgtccagttccaagggcaaggtggtagacctctacgatata
ctccgggtgtacacccccgaagtaacccgctacctttttgcagggacccggcccaatacg
gaatttgttatttcctttgacctggatgttattaagatttacgaagattatgacaagacc
gaacggattgcctggggagtagaaaaagccaaggatgaggaaacctacctgaaggaacgg
cgcatctatgaactatcccaggtaaacggcatgcccaacatgatgccctatcaggtgccc
ttccggcatctctgcaacctgattcagattgccgacggcaatatcgacaaggtgattgcg
ggacttcctgatatcaaggaagaacagataccggctttccgcaaacgctgtgaatgcgcc
tggtactggattcgggaatgtgctcccgaggacttccggttccacctccggcctgccggg
gaacgggcagaactgaccgatgcagaaactgccgcagtccgggacctgcgggaccaggtg
gtagccagaatcgaaaccttcgctgacgacaagacctgcggcgaagcgatctatgcggta
gccaatgaacaccagatggatggcaaggtcctgttccgggccgcctaccaggctctgatc
ggaaaggatcagggaccacggctcgccaacttcctacgaaacatcgataaaaaccggctg
cttgagatactgaaggcttattaa
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