Sphingobium chlorophenolicum: Sphch_0021
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Entry
Sphch_0021 CDS
T01522
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sphch_0021
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sch01007
]
Sphch_0021
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sch03016
]
Sphch_0021
Enzymes [BR:
sch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Sphch_0021
Amino acid related enzymes [BR:
sch01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Sphch_0021
Transfer RNA biogenesis [BR:
sch03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sphch_0021
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AEG47724
UniProt:
F6ESR5
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All DBs
Position
1:20090..21670
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AA seq
526 aa
AA seq
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MTVSELIRTAAQASKAWPYEEARKLLKRYQNGAPEKGHILFETGYGPSGLPHIGTFNEVL
RTTMVRNAYHALSDIPTRLIAFSDDMDGLRKVPDNVPNQAMLAQHLGKPLTQVPDPFEKF
ESFAHHNNAMLREFLDRFGFDYEFVSATDRYRSGGFDDALKNVLRHYQDIMDIMLPTLRK
ERQATYSPVLPISPKSGIVLQVPVEVIDADKGLIRFEDEGDIIEQSILSGGAKLQWKVDW
AMRWVALGVDYEMAGKDLIDSVTQSSKICRALGARPPEGFNYEMFLDEKGEKISKSKGNG
LSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYPKQAVEQQLGNP
VHHIHDGKLPQGELPVTFGLLLNLVGVMGDASREQVWGYLQNYVAGANAETYPELDALIG
HALAYHRDFVAPTLQRRAPTENEAAALRKLDAELAALPDDATAEDIQNIVYAIGKDDAYG
FAELRDWFKSLYQTLLGADQGPRMGSFIALYGIANSRRLIAEALAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtccgaactcatccgcaccgccgctcaggcgtccaaggcctggccctatgag
gaagcccgcaagcttctgaagcgctatcagaacggcgcgcccgaaaaggggcatatcctg
ttcgaaaccggctatggcccgtcgggcctgccgcatatcggcacgttcaacgaagtgctg
cgcaccaccatggtccgcaacgcctatcacgcgctgtcggacattcccacgcgcctgatc
gcgttcagcgacgacatggatggcctgcgcaaggtgccggacaatgtccccaaccaggcg
atgctggcgcagcatctgggcaagccgctgacgcaggtgcccgatccgttcgaaaagttc
gaaagcttcgcgcaccataacaacgccatgctgcgggaatttctggaccgcttcggcttc
gattacgagttcgtctccgccaccgaccgctaccggtcgggcggcttcgacgatgcgctg
aagaatgtcctgcgccattatcaggacatcatggacatcatgctgccgaccctgcgcaag
gaacggcaggcgacctattccccggtcctgccgatcagcccgaagagcggcatcgtgctg
caagtgccggtggaggtgatcgacgccgacaagggcctgatccgtttcgaggatgagggc
gatatcatcgagcagtccatcctgtcgggcggcgcgaagctgcaatggaaggtcgactgg
gcgatgcgctgggttgcgctgggcgtcgattatgagatggcgggcaaggatctgatcgat
tccgtcacccagtcgtcgaaaatctgccgcgccctgggcgcccgcccacccgaaggcttc
aattacgagatgttcctcgacgaaaagggcgagaaaatctccaagtccaagggcaacggc
ctcagcctggagcagtggctgacctatggcccgcaggaaagcctggccttctacgcctat
cgcgaaccgaagaaggccaagcaactccatatgggcgtcatcccccgcgccgtggatgaa
tattggcagtttcgcggcaattatccgaagcaggcggtcgagcagcagctcggcaatccg
gtccaccacatccatgacggcaaactaccgcagggcgaactgccggtgactttcggcctg
ctgctcaatctggtgggcgtgatgggcgatgccagccgcgaacaggtctggggctatctc
caaaattatgtcgcgggcgcgaatgccgaaacctatccggaactggacgcgctgatcggc
catgctctggcctatcaccgcgatttcgtcgctcccacgctccagcgccgcgccccgacc
gaaaacgaagccgccgcactgcgcaagctggacgccgaactggcggcgttgccggacgat
gccacggcggaggatatccagaatatcgtctacgccatcggcaaggatgatgcctatggt
ttcgccgaactgcgcgactggttcaaatcgctctaccagacgctgttgggcgccgatcag
gggccgcgcatgggcagcttcatcgcgctctacggcatcgccaacagccgccgcctgatc
gcggaggcgttggcggcctga
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