Spiroplasma chinense: SCHIN_v1c11930
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Entry
SCHIN_v1c11930 CDS
T06905
Symbol
rpoE
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
schi
Spiroplasma chinense
Pathway
schi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCHIN_v1c11930 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schi03021
]
SCHIN_v1c11930 (rpoE)
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c11930 (rpoE)
Transcription machinery [BR:
schi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCHIN_v1c11930 (rpoE)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCHIN_v1c11930 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QEH62386
UniProt:
A0A5B9Y6N2
LinkDB
All DBs
Position
complement(1336625..1337080)
Genome browser
AA seq
151 aa
AA seq
DB search
MENKPTIEMAFDFLHNSKGDASFEDIWNAISKEIAGSNEDKNFIIAELYSDLVLDNRFAL
TADGKWGLRDYLKFDDVKKQYDYVDKFETTEEFEDIDYVSADLYGDSDTTSKIGKVKDIL
DADDLDDDDEDEDDDLDSDEISLDLDDSFDD
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaacctacaatagaaatggcttttgactttttacataatagcaaaggcgat
gctagtttcgaagatatttgaaacgcaatttctaaagaaatcgcaggttcaaatgaagac
aaaaacttcataatagcagaattgtatagtgacttagtattggataatagatttgcgcta
acagctgatggtaaatgaggattaagagactatctaaaatttgacgatgtaaagaaacaa
tatgactatgttgacaaatttgaaacaacagaagagtttgaagatatagattatgtgagt
gcagatctttatggagattcagacactactagcaaaataggaaaagttaaagacattctt
gacgcagatgacttggatgacgatgacgaagacgaagatgatgatctagattcagatgaa
atttcattagatcttgatgacagttttgacgactaa
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