Shewanella chilikensis: GII14_12250
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Entry
GII14_12250 CDS
T08813
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
schk
Shewanella chilikensis
Pathway
schk00240
Pyrimidine metabolism
schk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GII14_12250
Enzymes [BR:
schk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
GII14_12250
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QIJ04844
UniProt:
A0A6G7LSZ4
LinkDB
All DBs
Position
complement(2679449..2680366)
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AA seq
305 aa
AA seq
DB search
MLKQYLDIHPEVQAALEQGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
AILKGRLKVGMSQEEINYLGKAGEAVIKTSRRDIPFIVAKGADGATTVASTMILAAMAGI
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDLGLTREYLETQGVPV
VGFQTDKLPAFYTRESDFSVDYRLEQPVEVAAAMKAKWDMGLKGGMVIANPIPHEHALDK
ALIDGAIARAVAEMDEKGIGGKASTPFLLAKVAEITEGHSLTANIELVYNNAKLAAEIAR
EYVAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagtatctggatattcatcctgaagttcaagccgccctggaacaaggcaag
ccggtggtcgcgctggaatcgaccattatttcccatggtatgccgtatccgcagaacgtt
gagacagcgctcaaggtggagcagatcatccgtgataacggcgctgtacccgcaaccatc
gccattctcaagggccgcctcaaagtaggcatgagccaggaagagattaattatctgggc
aaggccggtgaggccgttatcaaaaccagtcgccgtgacattccctttattgtcgccaaa
ggtgcagacggtgccaccacagtagcttctaccatgatcctggcggcaatggccggtatt
aaggtgtttgctaccggtggtatcggcggtgtacaccgcggcgctcagcaaactttcgat
atctctgccgatttgcaggaactggccaacacagatgtggccgtggtttgcgccggtgcc
aagtctattttggatctgggcctgacccgtgaatatctggaaacgcaaggcgtgcctgtc
gttggtttccaaaccgataaactgccggctttctacactcgcgagagtgacttcagtgtc
gactatcgcttggaacaaccggtagaagtggctgccgccatgaaagccaagtgggacatg
gggctcaagggggggatggtgattgccaacccaattcctcacgagcatgcgttggataaa
gcactgatcgatggcgcaatcgcccgcgcagtagctgaaatggatgaaaaaggcataggc
ggcaaggcttcaacgccgttcctgttggccaaagtggccgaaattaccgaaggtcacagc
ctgactgccaacattgaactggtatacaacaatgccaagttggcggctgagattgcccgc
gagtacgtggcccgctaa
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