Siniperca chuatsi (mandarin fish): 122865511
Help
Entry
122865511 CDS
T08948
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122865511 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
JAG1-like_EGF2
cEGF
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
122865511
NCBI-ProteinID:
XP_044029972
LinkDB
All DBs
Position
LG18:complement(8282422..8306977)
Genome browser
AA seq
2471 aa
AA seq
DB search
MYRFFVKLTFLIPAIVISQGLKCALPTESCLNGGRCEATSNGNGECKCPSDYVGNRCQYP
SPCSPSPCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
TLTAFRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDVN
ECAQTPSPCLNGGVCVNEVGSYNCRCLQEYTGQHCETLYMPCSPSPCQNGGTCVQKGDTT
YDCSCLPGFTGQHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINTNECASQPCLNNGKCIDKINSFYCECPKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGAMCNINIDECAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCHDGINTFTCTCPLGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGTCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAACTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYQCVCPSGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDRVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQITPDVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNHSSAFLRDLSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADRWPEWASMPANVLGQMKESVSAMVSPRKRRELDPVQVKGSVVY
LEIDNRQCYQQSSECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSSSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWDDEDPDCRRFRFEEQAMLDLSDHTDHRKWTQQHLDAADLRIASIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPLFLAAREGSYETAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSIPLSTSSLSPPLCSPNDYLSNLKPTLSVKKVRKL
SSSGKGGKDGGKDNRVKKKKSLDGKGNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDSHMGQMSMGKDMGRMSFDPNPPRLSHLPVSSPSNQGTTSIGGWV
SRMHPGVGQQGSFTQAPPISHNMMGALHGVSTATLSHIMGYQNLQTSHLGSSAHMMQQAH
SRQLQHQNSNSTTAGQSLNQSFPNVELNGSDMQQNNGCSMPIHTVMPQETQILGTQFLTP
PSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIH
SQMNLIPDQFK
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacatttctgattcctgcaatcgtcatctcacaaggt
ctaaaatgtgccctacccactgaatcatgcctaaatggaggacgatgtgaagccacctct
aatggaaatggagaatgcaagtgtcccagtgactacgtaggcaatcggtgccaatatcca
agtccttgcagcccttcaccctgccgcaatggtggcgagtgccgcgctgtttcccatggt
aacacgtttgatttccgttgcgtgtgccgcctgggtttcaccgaccggctatgcctgacc
cccaccaaccatgcctgcatgagctccccttgtcgcaatggaggaacatgtgatctcatt
accctcactgccttccgatgccgctgcccgcctgggtggtcaggtaaaacctgccagctt
gccaatccatgtgcttccaacccatgcgcaaacggtggtcagtgctcagccttcgattcc
acctacatctgcacctgcccacccgccttccacggtcaaacctgcaagcaagacgtcaac
gagtgtgcccagactccctctccctgtctcaatggtggtgtgtgtgtgaatgaggtgggc
tcatacaactgccgctgtcttcaagagtacactggccaacactgtgagaccctctacatg
ccatgcagcccctcaccatgccagaatggaggcacctgtgtccagaagggagacaccacc
tatgattgtagctgcctgccaggcttcacaggtcagcactgtgagcacaacattgatgac
tgtccaggccacaactgccagaatggtggtgtgtgtgtggatggtgtgaacacctacaat
tgccagtgcccacctcattacacaggtcaatattgcacagaaaatgtggatgagtgtgag
ttgatgcccaatgcatgccagaatggagggacatgccatgacactcatggcagctatcac
tgcgtttgcgtcaacggatggacgggtgacgactgcagtgagaacattgacgactgtgcc
agtgcagcttgttaccatggtgctacctgccacgaccgtgtagcctcctttttctgcgag
tgtcctcatgggcgcacaggtttgctgtgtcaccttgatgatgcctgcatcagcaatcca
tgtcaaaagggttccaactgtgacaccaacccagtcaatggcaaggcaatctgcacctgt
cccccaggttacactgggtcagcctgcaacctggacattgacgagtgctccctcggtgcc
aacccttgtgaacacggtggtcgctgcctcaacaccaaaggctctttccagtgtaagtgt
cttcaaggatatgaaggacctcgttgtgaaatggacgtcaatgaatgcatgtctaatcct
tgccataatgatgccacctgcctggaccagattggagggttccactgcatctgtatgcca
ggatatgagggtgtgttctgccacatcaacacaaatgaatgtgccagccaaccttgtctc
aacaatggcaagtgcatcgacaagatcaactctttctactgcgagtgccccaaaggtttt
tcagggagtctgtgtcaggtggacattgacgaatgtgccagcacaccctgcaagaatgga
gctaagtgtacagatggtcccaacaagtacacctgcgaatgtgctgaaggttacacaggg
cagcactgtgagactgacatcaacgagtgctactctgacccctgccactatggcacctgt
aaggatggcctagcctccttcacctgctactgccgtcctggctacactggccgcctgtgt
gagaccaacatcaatgagtgtctaagccagccctgcaagaatgggggcacttgtcaggac
agggagaacacatatatttgtgcctgccccaaaggcactgcaggtttcaattgtgaggtg
aacctggacgactgtaagagcaaaccctgcgactacgggaggtgcattgacaaaatcaat
ggctacgagtgtgcatgcgagcccggctacacaggagcaatgtgtaacatcaacatcgat
gagtgtgccatcaacccctgtcacaacgggggcacttgcgttgatggcattaacagcttt
acctgcctgtgcccagagggctacaacgatgccacctgtttgtctcaggtggatgagtgt
ggcagcaacccctgtatccatggccgatgccaagacctcatcaatggctacaaatgtacc
tgtgactctggctggagtggcccaaattgtgacatcaataacaacgagtgtgagtccaac
ccgtgcatgaatgggggaacctgcaaggacatgaccagcggataccactgcacatgcaga
gccggcttcacaggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggcacctgcattgatgatgtggctggatacaagtgcaactgtttgctgccc
tacactggtgaaaactgtgagaccctgctggcaccctgcagcccgagaccctgtaaaaac
ggtggagtatgtaaggaggctgaagactaccagagcttctcctgcatctgccctgaagga
tggcaaggtcaaacatgtgagattgatatcaacgaatgtgtgaagagcccatgccgcaat
ggtgctatttgccataacactatgggtggctatcagtgcaagtgccagccaggttacact
ggccagaagtgtgagacagacactgatgactgcaaaccaaatccctgcagtaacggtggt
ctgtgccatgatggcatcaacactttcacgtgtacctgcccgctcgggtttcgtggcggc
agatgtgagcaggacataaatgagtgtgagagtaacccctgtaggaatggcgccaactgc
accgactgtgtcaacagctacacctgcacctgcccacctggcttcagtggcatcaactgt
gagattaacaccaacgactgcactgacagctcttgcttcaatggtggcacctgtgtggac
ggaattaatgcgttcacctgcctgtgtctacctggattcactggcagctactgccaatat
gatatcaatgagtgtgactccaaaccgtgcctcaacggaggcacttgtcttgacagttat
gggacatacaagtgtacctgtcctcatggctacacaggagtcaattgtcagaatcttgtg
cgctggtgtgattcatccccctgtaaaaatggaggttcatgctggcagcagggagcctct
tacacctgccagtgtcagactgggtggactggtctctattgtgatatccccagtgtgtct
tgtgaggtcgcagccaaacagcaaggggtggaggtggctcacctgtgcaggaactcaggc
cagtgtctggatgctggaaacacacattactgccgctgccaggccggctacactgggagt
tactgccaagaacaagtggatgagtgctcacccaatccttgccagaacggcgctgcctgt
actgattatctgggaggctacagttgtgagtgcgtccctggctaccatggtgtaaactgc
tccaaagagatcaatgaatgtcagtcacagccctgtcagaatggaggcacctgcatcgac
ctcatcaacacatacaagtgctcctgtcccagaggaacacaaggtgtccactgtgagatt
aatttggatgactgcactccctccactgacccactgaccaacgagcccaagtgctttaac
aatggcaagtgtgtggaccgcattggaggttaccaatgtgtgtgcccgtcaggctacgta
ggtgagcgctgtgaaggtgatgtcaacgagtgcttgtcagacccctgtgaccccagaggg
tcctacaactgcattcagctcaccaacagctaccgctgcgaatgccgcactggatataca
ggtcagcgttgtgacagggtgtttgatggctgtaaaggaaaaccctgcaggaatggagga
acatgtgccgttgccagtaacacacctcatggtttcatctgcaaatgtccgcctggcttc
accggttcttcttgcgagtatgattctcgctcctgtgggagtctgaattgcaggaatgga
ggtacatgtgtgtcaggccacctaggcccacgctgcctgtgtccaccaaccttcacaggg
cctgagtgccagacccccactgacagcctctgcatctccaacccctgctacaatggtggc
acttgccagatcaccccagacgtgcctttcttccagtgcagctgccccagcaatttcaac
ggcctgctatgccacatcctggactattcctttgtcggaggctttggccgggacatcacc
ccacctccggaagtggaggtgagctgcgagattcctcagtgtgacgagtgggcagggaac
catatctgtgactcgctgtgcaacaaccacgcctgcggctgggatggaggagactgctca
cttaattttgatgatccttggcaaaactgctccgcggccttgcagtgttggcgctacttc
aacgatgggaagtgtgatggccagtgcaacagccctgggtgtctctatgatggctttgat
tgtcagggacaggaaggacaatgcaacccgctgtatgaccagtactgtaaagaccactat
gctgacggtcactgtgaccagggctgcaacaatgcagaatgcgaatgggacggcctggac
tgtgccaacaacatgccagagaagctggcagacgggcacttagttctggttgtccatatt
cccccagagcagcttaaaaatcattcttcagccttccttagagacctcagcagcgttctc
cacaccaacgtggtgtttcgccgtgacgccaaaggagaaccaatgatcttcccttactat
ggcaatgaacaggacctcgttaaacataacgtgctgaagcgctctgcagatcgctggcct
gagtgggcctcgatgccagccaatgttttgggtcaaatgaaggaaagcgtgtccgccatg
gtcagccctcggaaacgcagagagttggatcctgttcaagtcaaagggtcagtggtgtac
ctggagattgacaaccgtcagtgttaccagcagtctagtgaatgcttccagagtgccaca
gatgtagctgcattccttggagcactggcctccagtgggaatctcaacgttccctatatt
gaagctgtcaccagtgtgagacctactccctccagttcagagctctaccccatgtacgta
gtcttcttgggcttggctgctttgggtttcatctgccttggtgttctggtgtcccggaaa
cggcggcgagagcatggccagctctggtttcctgagggattcaaagtgtcagagcccagc
aaaaagaaacgcagagagccattgggagaggattctgttggattgaagcctatgaagaac
tctgacatcaatcttatggatgacaatcaaaatgaatgggatgatgaggatccagactgc
aggcggttcaggtttgaggaacaagccatgttggatttgagtgaccatactgaccacagg
aaatggacacagcagcatctggatgcagctgacctacgtattgcatctatcgctcctacc
cctcctcagggagagatagagaatgactgcatggatgtcaatgtcagaggaccagatggt
ttcactcccctgatgatcgcttcctgcagtggtggaggactggagactggtaatagtgaa
gaggaagaggatccctcagcagaaatcatctctgacttcatttaccaaggcgccaacctc
cacaaccagactgaccgcacaggcgagactgccctccatctggccgctcggtacgcccgc
tccgatgctgccaaacgcctcctggagtccagcgccgatgccaacgttcaggacaacatg
ggccgtacgccgcttcacgctgctgtggctgcagatgcacagggagtgttccagatttta
atccgaaaccgcgccactgatcttgacgcccgcatgcatgacggaacaacaccgctgatt
ctggcagcccgactggcggttgagggcatggtggaagagcttatcaactgccatgctgat
gctaacgccaccgatgattctggcaaatctgctcttcactgggccgctgctgtaaacaat
gtggaggctgctatggtgctgctgaaaaatggtgccaacaaagacatgcaagataacaag
gaagagacaccactcttccttgcagcccgtgaaggaagctacgagacagccaaggtactt
ctggagcactttgccaatcgtgagatcaccgaccatctcgaccagctgccaagagatatc
gcccaggaacgcatgcaccatgacattgtccgccttctggatgagtacaacgtggttagg
agtcccgggcttcacagcatccccctaagcacctccagcctctccccacctctctgctct
cccaatgactaccttagtaacctcaagcccaccctgtctgtcaagaaggttcgcaaactt
agctccagcggaaaaggagggaaggatgggggcaaagataatagagtgaagaagaaaaag
tcactggatgggaagggtaatttgctagacacatcagctgtcctctccccggttgattcc
ctcgagtcaccgcatggctacctgtctgatgtggcctctcctcccatgacatcgccattc
cagcagtccccacctatgtctctaaatcacctacaaggcaatggagactcccatatgggc
cagatgagcatgggtaaggatatgggacgtatgtcttttgaccctaacccaccccgtctc
tcccacctgcctgtgtccagccccagcaaccagggcacaacatccataggtggctgggtc
tccaggatgcacccaggtgtaggccagcaaggaagcttcacccaggcgccacccatatcc
cacaacatgatgggtgctctgcatggcgtcagcactgccactctgtctcacatcatgggc
taccagaatctgcagaccagccacctcggctcatctgcacacatgatgcagcaggctcac
tcgcggcagctccagcaccagaactccaactccaccacagccgggcagtccctcaaccag
agcttcccaaacgtcgagctgaacggctccgacatgcagcaaaacaacggctgctctatg
cccatccacactgtaatgccccaggagacgcagatcctcggcacccaatttctcacccct
ccctcccagcacagctattctggccccatggacaacacacctaaccaccaactacaggtg
cctgaccacccgtttctaactccctcccctggctcccctgaccagtggtccagctcgtcc
ccacattccaacatgtccgattggtcagaaggcatctccagcccacctacaagtatccat
tcgcagatgaatctgatcccagaccagtttaagtag
DBGET
integrated database retrieval system
