Siniperca chuatsi (mandarin fish): 122867374
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Entry
122867374 CDS
T08948
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03020
RNA polymerase
schu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122867374 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122867374 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122867374 (polr3a)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122867374 (polr3a)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122867374 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
122867374
NCBI-ProteinID:
XP_044034027
LinkDB
All DBs
Position
LG20:complement(9978051..10004131)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLSYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKLQFMDFLKRPNLAYLQKRGLKKKISDKCRKRTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFLQSFDIAIEHNKVVEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHMKDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVRVSLPRPAIMKPMALWTGKQI
FSMILKPSKECPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKHDLLDDG
YKKCDEYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYACPDEPALSQNELVLTADAIMKRADFLC
CRDSFLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVERTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPSPLKRPLLFD
SADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagaccgatgtggccaaaaaaataagccacatctgcttt
gggatgaaatctgctgaacagatgcgtcagcaggcccacattcaggtggtcagtaagaat
ctgtacagccaagacaccaaacacactccactgtcttatggagtgttggaccaccgcatg
ggcaccagtgagaaagacagaccctgtttgacatgtgggaagaatctggcagattgcttg
ggacattatggctacttggatctggagctgccatgctttcatgtcggctatttcaaagcc
atcataggaatcttacagatgatttgcaagacatgctcaagcataatgctgacaaaagag
gagaaactgcagttcatggattttttgaaaaggcccaacctggcctatctccagaaacga
gggttgaagaagaagatctctgataaatgccgcaaaaggacaatctgtctgaattgttcc
gctttcaatggaccagtgaaaaagtgtggcctgcttaagatcatccatgagaagtataaa
acaaccaagaaggtggtggatccttttgtgtcagaattcctgcagtcctttgatatcgcc
attgaacacaacaaagttgtggagcctctgctgaccagagcacaggaaaacctgaaccct
ctggtggtgctgaacatgttcaagaggattccccaagaagacattcccctgctgctgatg
aaccctgaggcagggaaacccgcggacctcatcctcacccgcctcctggtgcctcccctc
tgcatacgaccctctgtggtgagcgacctgaagtccggcaccaacgaagacgacctcacc
atgaagctcacagagataatcttcctcaacgatgtcatcaaaaagcatcgtatgacaggg
gcaaagacccagatgatcatggaggactgggacttccttcagctgcagtgtgctctttac
atcaacagcgagctttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtgcagagactcaaggggaagcaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggaagaactgtaatttctcctgacccaaacctgaggatcgatgaggtg
gctgtccctgtgcatgtggccaaaatcctgacatacccagagagggtgaacaaagccaat
ctggagctaatgaggaaactcgtccgcaacggtcctgaggttcaccccggagccaacttt
atccagaatcgtcacacacagatgaaaaggtttttaaaatatgggaaccgcgagaagata
gctcaggagctgaggtttggtgatgtagtggaaaggcacatgaaagacggagacatcgtc
ctcttcaatcgacaaccctcactgcacaaactcagcatcatggcccacatcgccagagtc
aaacctcacaggacatttcggttcaatgagtgcgtgtgcaccccgtacaacgccgacttt
gacggtgatgaaatgaaccttcatctacctcagactgaagaagccaaagctgaggccctc
gtcctgatgggtacaaaagctaatcttgtcactccaagaaatggcgaacctctgattgct
gctattcaggactttctgacaggagcctacctcttgacgctaaaggacacgttctttgac
agatcaaaagcctgtcagatagtggcatcaatccttgtgggaaaagatgaaaaagtcagg
gtctctctcccccgcccggctataatgaagcccatggctctgtggacgggcaaacagatc
ttcagcatgattctgaagccgagtaaggaatgtccagtcaaggcgaacctgcggaccaag
ggcaaacaatactgtggcaagggagaggatctctgtcacaacgactcgttcgtggtgatc
cacaacagtgagctgatgtgtggaagcatggacaaaggcaccttgggatccggctccaag
aacaacatcttctacatcttgcttagagactggggacagctggaggctgctaacgccatg
tcccgcctggcaagactcgctccagtgtatctctccaaccggggcttttctattggcatt
ggtgacgttacacctggccagggtctgctgaaggccaaacatgacctcctggatgacggt
tacaagaagtgtgacgaatacattgaagctctacagacgggcaagttgcagcagcaacct
ggatgcacggcagaggagactctggaggctctcatcttgagagagctgtctgtcatcaga
gaccgagctggcagtgcctgcctcagggagctcgacaagagcaacagccctcttatcatg
gctctttgtggctccaaaggatccttcattaatatctctcagatgattgcctgtgtgggt
cagcaggccataagtggctctcgagtgcctgatggttttgaaaatcgctctctgcctcac
tttgaaaagcactcaaaactgcctgctgctaaaggctttgtggccgacagcttctattct
ggcctgacgcccacagagttcttcttccacacaatggctggccgggagggtctggtggac
actgctgtgaaaactgcagagactggatacatgcagaggcgtctggttaagtccctggag
gatttgtgctcgcagtatgacctgacagtacgcagctccactggcgacatcatccagttt
atttatggtggcgatggtctggatcccgctgccatggagggaaaggatgagccgcttgag
tttaagagagtcttggacaacatccgggcggtttacgcatgtccagacgagcctgcactc
agtcaaaacgagctggtcctcactgcagatgctatcatgaagagagctgacttcctgtgc
tgcagagacagcttcttggaggagataaaaaaatttattaagagcatctcagaaaggatc
aagaagaccagagacaaatacggcatcaatgacaatggcaccagcgagccaaaagttctc
tatcagctggaccgcataacccccacccagctggagaagttccttgaaacctgcagagac
aaatacatgagagctcagatggagccaggctcagcagttggggccctgtgtgcccagagc
attggagagcctggtactcagatgacgctgaaaaccttccactttgctggcgtagcgtcc
atgaacattactctgggcgtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcacccctataatcactgctcatttggatgtggaagacgacgctgactttgccaggctg
gtgaaggggaggatcgagaaaacacttctaggagagatttctgagtacatagaagaggtt
tttctaccggatgactgttttatcctggtgaaattgtcactggagagaataagactgctg
cgactagaggtaaatgcagaaacggtacgttactccatctgcatgtctaaactacgagtg
aaaccaggagacattgctgtgcatggcgaggctgtggtgtgtgtgtctccacgagagaac
agtaaaagctccatgtactacgtgctgcagtcattaaaagaggaactgcctaaggtggtg
gttcaaggtatacctgaggtttcccgagctgtcattcacattgatgaacagagcggaaag
aacaagtacaaactcctggtggagggggacaacctgagagctgtcatggcaacacatgga
gtgaatggaagcaggaccacttcaaacaatacatatgaggttgagaggaccttgggtatt
gaggctgctagatccaccatcatcaatgagattcagtacaccatggtgaaccatggaatg
agcattgaccggcgtcacgtcatgcttctggcagatctcatgtcctacaaaggggagata
ttgggaatcaccaggttcggtttagccaaaatgaaggagagtgtcctcatgctggcctcc
ttcgagaaaacagctgatcatctcttcgacgctgcctactttggacaaaaggactctgtc
tgtggtgtgtctgagtgcatcattatggggattccaatgaacattggaacaggactgttt
aaactcctacacaaggctgacaaggatccctctccactcaaaaggcctctcctctttgac
agtgcagacttccatatacctctgatcacatag
DBGET
integrated database retrieval system
