Siniperca chuatsi (mandarin fish): 122869085
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Entry
122869085 CDS
T08948
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122869085 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122869085 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122869085 (grin2ca)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122869085 (grin2ca)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122869085
NCBI-ProteinID:
XP_044037603
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All DBs
Position
LG21:complement(2734543..2798133)
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AA seq
1412 aa
AA seq
DB search
MGVRLGCLSDSPWWLPPLLLLLFCTVPCCSGRPFGLPMPSVNVAVVFSGSAYQTEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQILDF
ISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYETYVDYIKSFTDTSYFIWDLQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCS
HEEAQYLFTMAAESGLVGPGYIWIIPSLAVGNPDIPPPDSFPVGLISIITDRWRMSLRKR
VRDGVAIVVKGVQSFRKQRGFVPEGHSDCHNPVKPSTTNDTLFRHMMNVTWEHNDFSFNS
NGYLVNPAMIIITLDRERQWDRVGTYEMGILQMRYPVWPRYGSYMEPVSDYRHLTVATLE
ERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLSRT
IKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVE
TGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLVT
AKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLA
AFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQ
KGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSR
WKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGL
SLLVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEQTDHNGSMPSPDITTNY
TQANMLKMLQTAKDMVSSARVENSLDNATKTIENWSRRGADNVRAGLPPRVTTTDMTHGR
LPYISSITDNHSPYPQRALTPTFPVHYGDTSTQPLLDKPRVVTRPNPLRYTLPHRSSQHV
LERTLPISSLSSPHIAMRDPAPSGTSNPHHSSRLYVENQARHPTSPFVPYREFQVPDIYV
EHKAPLRRKFSYPPDCVSRRRRSHSYMFDAADPRVRGDYDEPRSCLAELRANHLLNNHAP
VAAAMACTSGHYPGGSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRIHQ
VDETKPSTSTSPSTRVDMPDLFPRVVVANQKPKLYGSLGHNLSCFPLAAEPAYLDPAHMG
SYPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLA
QGPSQFYDGSKDMCHLFPCTSHCPDSAAMLPRMSDRHVVYHNNMFGPYDGTGKREDPGPG
NRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccgtggtggctgccgccgctgctgctg
ctgctgttctgcactgtcccctgctgttcaggaaggccgttcgggcttcccatgccctct
gtgaacgtggcggtggtgttcagcggctcggcctaccagacagagattaaggggcggtta
agccgggaaaacttcatggacctgcctctggaggtgaaccccatcactgtgctggtcaac
aacaccaacccacgggcactgctcacccgcatctgtgacaccctctccaccaaccgcgtc
catggcgtggtgtttgaggacaacgttggttcggaggccgtggcacagatcttggacttc
atttccactcagacagctgtgcccatcgtgggcatcagcggaggctctgctgtcgtcctg
ccatacaagggtgagggctccaacttcctccagcttggctcctccatcgagcagcagatc
aacggcatgttcaaggtaatggaggagtacaactgggacagctttgtggtcataaccagc
ctctacccgggctacgaaacctacgtggattacattaagtccttcacagacaccagctac
ttcatatgggatctgcaggacgtgctgaccttcgacatgtccgccgacggcatgaacgac
atccgagcacgaaggctgctgcagcagatcgacgcccaggtgctgttggtctactgctcc
catgaagaggctcagtacctgttcaccatggcagccgagtcagggctggtggggccaggc
tacatctggattatccccagcctggcagtggggaacccagacatccccccacctgacagc
ttccctgtggggctcatcagcatcatcacagaccggtggagaatgagcctgaggaagagg
gtgcgggacggggtggccatcgtagtgaaaggcgtgcagagctttcggaaacagagaggc
tttgttcccgagggccacagtgattgtcacaaccctgtcaagccatccactactaatgac
actctgttcaggcacatgatgaatgtaacctgggaacacaatgacttctccttcaacagt
aacggttacctggtgaatccagccatgataattatcactttggacagagagagacagtgg
gacagggtggggacctacgagatggggatcctgcaaatgcgataccccgtgtggccacgg
tatggctcctacatggagccggtgtcggattacaggcatctgacggtggccacgctggag
gagaggccctttgtcattgtggaggcagtggaccctgtgactggtacatgtgtcagcaac
actgtaccctgccgacgacagtccaacaagacggaggctattgtgggtcacacggagccg
tacacaaaactgtgctgtaagggcttctgcatagacatcctgaaaaagttgtcccgcacc
ataaagttttcctatgacctctacctggtcaccaacggcaagcatggcaagctggtccga
ggcatttggaacgggatgatcggagaggtgttctacaaacgggcagacatggccatcggc
tcgctgaccataaacgaagagcgctctgagattattgacttctcagtgccgtttgtggag
acagggatcagtgtgatggtggccagaagtaacgggactgtctcaccttctgccttttta
gaaccatacagtccggcagtctgggtgatgatgttcgtcatgtgtctgactgttgtggcc
atcacagtcttcgtctttgaatactgcagtccagttggatacaaccgcagcctggtcact
gccaaagatcccggaggtcccaccttcactattgggaagtcagtgtggctgctgtgggga
atcgtcttcaacaactcggtccccattgagaatccaaagggcaccaccagtaaaatcatg
gtcctggtctgggctttcttcgctgtcatcttcctggcttcctacacagccaacctggca
gccttcatgatccaggagcaatacatcgacacggtctctggactgagtgacaaaaagttt
caaaagccacaggagcagtaccctccgttccgctttggtacggtcccaaatggcagcaca
gagcgcaacataaggagtaactaccctgaaatgcactcccacatggtcaaatacaaccag
aagggagtagaggatgcccttaacagcctcaaaacagggaaactggatgcctttatctat
gatgctgctgtgctgaattacatggctggcaaagatgagggctgcaagctggtgaccatt
ggcagtgggaaagtgtttgctaccactggttatggcatagccctgcagaaagattcacgg
tggaaacgacccatcgacctggccctgctccagttcctggctgatggtgacacacagaag
ctgcagaccgtctggctcacagggatctgccgtaatgagaagaaagaggtgatgagcagt
aagctggacattgacaacatggcgggggtcttctacatgctgcttgtggccatgggcctg
agcctgctggttttcgcttgggaacatctgctctactggaaactacgacattcagtccgc
aaatcagagcgcctggacttcctcctagctatcagtagaggcatctacagctgcttcaac
ggagtagagcaaactgaccacaatgggagcatgccaagtccagacatcactaccaactat
acacaagccaatatgctaaagatgctgcagacagccaaggacatggtgtcctctgccaga
gtggagaactctctagacaatgccacaaaaacaatagagaactggagcagacggggggcc
gacaatgtgcgagctggcctgccacccagagtgacgaccacagacatgacccatggccgt
ctgccctatatctccagcatcacagacaaccactcaccataccctcagagggccctcaca
cccaccttcccagttcattatggggacacctccacccagcccctcctggataagccccgg
gtggtgacccgacccaatccactccgctacacgctgccgcaccgcagcagtcagcatgtc
ctagagaggactctgccgatctccagcctcagcagccctcatatcgccatgcgggaccct
gctccctctggtacttctaacccccaccacagcagcaggctgtatgtggagaaccaggcc
cggcacccgacgtccccttttgttccttacagggagttccaggtgcccgatatctacgtg
gagcacaaagctccgctgaggaggaagtttagctacccccctgactgtgtgagccggagg
aggaggtcccatagttacatgtttgatgctgcagaccccagagtgagaggtgactatgat
gaacctcgatcctgccttgctgaattgagggccaatcacctcctgaacaaccatgcccct
gttgctgctgccatggcctgcacttcaggacactacccgggcggcagcaccagctgcaac
tcctgtatgaagtcctatctggagcctgaaatggatgacataccactcctggggaaggac
aaactcaaccgccgcgcctcatttctcaaagctacatggggcaacgataggatccatcag
gtagatgaaacaaagccctccacatccacatctccctccacccgtgtagacatgcctgac
ctgtttccacgggtggtagtggccaaccaaaagcccaagctatacggcagtctggggcac
aacctgtcctgcttccccttggctgctgagcctgcctacttggacccagcccacatgggt
tcctacccctacaagcaaaagctcaagtactctgagtccacccggctgccctcctacagg
gaagccatactgcagaatgccgctgccctgcgccgctcctcctccacagtggtgcacaga
cactactccacctacctgaactcgtacacagacttaccagtgtatgtgggaccactggcc
caaggaccgtcccagttctacgacggttctaaggacatgtgccacttgtttccctgtaca
agccactgcccagatagcgcagcaatgctgcctcgtatgagtgacagacatgtggtttac
cacaacaatatgtttgggccctacgatggcacaggaaagagggaagacccaggccctggg
aacagagagcggaggcaggtgttggtggcgcgcagagtcaacagtccctatgtgccaaag
ccctggggcagagtatccagcctggagtctgaggtctga
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