Siniperca chuatsi (mandarin fish): 122872967
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Entry
122872967 CDS
T08948
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00052
Galactose metabolism
schu00511
Other glycan degradation
schu00531
Glycosaminoglycan degradation
schu00600
Sphingolipid metabolism
schu00604
Glycosphingolipid biosynthesis - ganglio series
schu01100
Metabolic pathways
schu04142
Lysosome
Module
schu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122872967 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
122872967 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122872967 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
122872967 (glb1)
00511 Other glycan degradation
122872967 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122872967 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122872967 (glb1)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
122872967 (glb1)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122872967 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
122872967
NCBI-ProteinID:
XP_044045072
LinkDB
All DBs
Position
LG3:13710460..13719427
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AA seq
647 aa
AA seq
DB search
MSLLTVGSVLLLLFGHSLGAPPSFSVDYKNDCFRKDGEEFRYIAGSIHYSRIPRVYWKDR
LLKMYMAGLNAIQTYIPWNYHEESPGRYSFSGDRDVEYFLQLAQDIGLLVILRPGPYICA
EWEMGGLPAWLLNKKDIVLRSSDPDYTAAVDQWMGKLLPMIKPYLYQNGGPIITVQVENE
YGSYFACDYNYMRHLTKLFRSHLGEEVVLFTTDGAGLGYLKCGSIQDLYATVDFGPGGNV
TAAFDAQRHAEPRGPLVNSEFYTGWLDHWGSLHSVVSSAIVVKSLNEILAVGANVNLYMF
IGGTNFGYWNGANTPYDPQPTSYDYDSPLTEAGDLTEKYFAIREVIKMYRKIPEGPIPPT
TPKYSYGTVVMKKLQTISDALETLSFSGPVKSMYPQTFIELNQAFGFVLYRTTLPVDCST
PTPLSSPLNGVHDRAYVSVDGVAVGILERNKAITVNVTGKAGSQVDILVENMGRINYGKY
INDFKGLVSNLTLGTETLLGWTMYSLSIDEAVSQGLLGKRKPTDTPQPATHSLPAFYEGR
FIIPDGIPDLPQDTYIKLPKWRKGQVWINGFNLGRYWPTRGPQVTLFVPANILSTAAPNN
VTVLELEEAPCSSGPCSVEFTTTPILNATVQSDYKQHRRLFTKDGLL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctcacagttggaagcgtcctgctgctgctgtttggacattcactcggggca
cctccttcattcagcgtggattacaagaatgactgctttcggaaagatggggaagagttt
cgttacatagcaggaagcatccattacagcaggatccccagagtctactggaaggatcga
ctgctcaagatgtacatggcaggactgaatgccatccagacgtatatcccttggaactac
cacgaggagtctccaggccggtacagttttagtggagacagggatgtggaatatttcctt
cagctggcccaagacatcggcttattggtaatccttcggcctggaccttacatatgtgca
gagtgggaaatgggtgggctgcctgcctggcttctcaacaagaaagacattgtgttgcgg
tcctcagatccagattacaccgcagcagtagatcagtggatggggaagctattgccaatg
ataaaaccttatctctaccagaacggaggtcctatcatcactgtacaggtggagaatgaa
tatggcagttatttcgcctgtgactacaactacatgcgtcacctgaccaagctgttccgg
tctcacctgggcgaagaggtggtgctcttcaccacagatggagctgggcttggctacctc
aagtgtggctccatacaagatctctatgccactgttgactttgggccaggtggaaatgta
accgctgcctttgatgcacagagacacgctgaacctcgtggacctttggtgaactctgaa
ttttacactggctggctggaccactgggggtcacttcactccgtcgtgtcatctgccata
gtggtcaagtccctcaacgagattctggccgtgggagcaaacgtaaacctgtacatgttc
ataggaggaacaaactttggatactggaatggtgccaatacaccatacgacccgcagccc
acgagctacgactacgattccccgctcacggaagcaggagacctcacagagaagtacttt
gctattcgagaggtgatcaaaatgtaccgtaagataccagagggaccaataccaccaaca
actccaaagtattcatatgggactgttgtgatgaaaaagctccagacaatatcagatgcc
ttagaaacgctgtctttctctggccccgtcaaaagcatgtatcctcagactttcattgaa
ctgaaccaggcctttggttttgtgctctacaggacgactctgcctgttgactgcagcaca
ccaactccactgtcgtctccactgaatggcgtccatgatagagcgtatgtgtcagtggac
ggggtggctgtggggattctcgaaaggaacaaagccataacggtcaatgtgacggggaaa
gctggcagtcaggtggacatactggtggagaatatgggccgaatcaactatggaaaatac
atcaatgactttaagggtctggtgtccaacctgactctggggacagaaacgctcctcggc
tggaccatgtacagcctcagtattgatgaagcagtcagtcagggccttctcggtaaaagg
aaaccaacagacacacctcagcctgctactcactctcttcccgccttctacgagggaaga
ttcatcattcctgacggcatcccagacctcccgcaggacacctacatcaaactgcccaaa
tggaggaaggggcaagtttggattaacggcttcaatttaggacgttactggccgactcga
ggccctcaggtgactctttttgtccctgccaacatcctcagtacagctgcacccaacaat
gtgactgtcctggagctggaagaggccccgtgcagctcagggccatgtagtgtggagttt
actaccacccccatcctgaatgcaacagtccagtctgactacaaacagcacagaagactc
ttcactaaagatggtttgttgtga
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