Siniperca chuatsi (mandarin fish): 122874541
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Entry
122874541 CDS
T08948
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03020
RNA polymerase
schu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122874541 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122874541 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122874541 (polr3b)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122874541 (polr3b)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122874541 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122874541
NCBI-ProteinID:
XP_044048478
LinkDB
All DBs
Position
LG4:complement(15892100..15920934)
Genome browser
AA seq
1132 aa
AA seq
DB search
MEVLGGEFCNMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEFAKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHHKLVNTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEHMITKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLTYPQRPMVK
TKTIEMIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGERVENKQVLVNKSMPTVTQTPLE
GSTQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcttggaggagagttttgtaacatgactcctcaggagctggcggctcctgtc
aacactgtagcggaaaaatggaaactgttaccagccttcctgaaggtgaaaggactggtt
aagcagcacattgactcattcaactatttcatcaatgtggagataaagaaaataatgaaa
gcaaatgagaagatcacaagtgatgcggatccaatgtggtacctcaaatacctcaatatc
tatgttggcatgcctgatgttgaagaaagcttcaacgtgaccagaccagtatctcctcat
gagtgtcgtctcagagacatgacctactcagcgcccatcacagtggacatagagtacact
cgtggcagtcagagaatcatccgcaatgcactgcccatcggaaggatgccaatcatgctg
cgaagctcaaactgtgttctcacaggaaagacgtcaatggagtttgcaaaactcaatgaa
tgtcctctggatccagggggttatttcattgtaaaaggtcaggagaaagtaattttgatc
caagagcagctgtccaagaatcgaatcattgtggagcaagacaggaagggtgcagttgga
gcctcagttaccagctccactcatgagaagaaaagcagaactaatatgattgtcaaacaa
ggcagattctacctgagacacaacacgctgtcagaggatgccccaattgccatcatattc
aagggtatgggtgtagagagtgaccaggagatcgtgcagatgatcggtacggaggagcac
gttatggccagcttcgccccgagcctggaggagtgtcagaaggcccagatcttcacacag
actcaggctctgaggtaccttgggaataaagtacggagacagcgcatgtggggaggcccc
aagaagaccaagatggaggaggccagagagcttttggcgtctcttatcctcacacatgtg
cctgtgaaagagtttaactttcgggctaagtgtatttaccttgctgtgatggtgcggagg
gtgatcctagctcaaggggacaacaaggtggacgacagagattactatggcaacaaacgt
cttgagttggctggacagctcctgtctctgctgtttgaagatctgtttaagaagttcaac
tctgaactgaagaaaatcgctgaccagatcatccccaagcagagagcagctcagtttgat
gtggtgaagcacatgcggcaggatcagatcaccaacggcatggtcaatgccatatccacg
ggcaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtcctgtct
cgactatcctatatttcggctcttggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccgcgctccctgcagccatcacagtggggcatgctgtgtccg
tctgacacccctgagggagaggcctgtggtctggtgaagaacttggctctgatgacccac
atcaccaccgacatggaggacggtccgatcatcaaactggccttcaacctgggtgtagaa
gatgtcaacctgctgtgtggagaggagctctcctatccgagcgttttcctcgtcttcctc
aatggtaacattcttggtgtgattcgagatcatcataagctggtcaacaccttcagactg
atgcgcagggcgggttttatcaacgagtttgtgtctatctccaccaatttgaccgaccgc
tgcgtctacatctcatctgatggaggacgtctctgcaggccgtacatcatagtgaagaag
ggacagccaatggtgaaaaacaaacacatagaagatttgtcacagggctacagaaccttt
gaagactttctgcacgaaggcctggtggagtacctggatgtcaatgaggagaatgactgt
cagatcgccctttatgaacacatgataaccaaagacacaacacacttagagatcgagccc
ttcacgctgctcggggtgtgtgctggcctcattccctacccccaccacaaccagtcaccc
aggaacacataccagtgcgctatgggcaagcaggccatgggtactattggctacaaccag
aggaaccgtatcgacactctcatgtacctgctgacgtatcctcagaggcccatggtcaaa
acaaaaaccatcgagatgattgactttgagaagctgcctgctggtcagaacgccaccgtg
gctgtgatgagctacagcggctacgacattgaggacgctctggtcctcaacaaagcctcg
cttgacagaggatttggcaggtgcctcgtctataaaaacgccaagtgcacactgcggcgt
tacaccaaccagacctttgacaaggtgatggggcccatgctggatgctgccacacgaaag
cccatctggaggcacagcatcctggatgctgacggcatctgctgccccggtgagagagtg
gagaacaagcaggtgttggtgaacaagtccatgccaactgtcacccagacaccactggag
ggcagtacccagccaggccagccccagtacagagacgtgcccatcagctataagggctca
actgattcgtacatcgagaaggtcatgatctcatccaacgctgaagacgctttcctcatc
aagatcctcctgaggcagactaggagaccagagataggagacaaattcagcagtcggcac
ggacagaaaggtgtttgtggccttattgttccacaggaggacatgccgttctgtgactcg
ggcatctgtccagatattattatgaaccctcacggatatccctccagaatgacggtggga
aagttgattgaactgctggctgggaaggcgggagtcctggacggacggtttcactacggt
acggctttcggaggcagcaaagtgaaggatgtgtgtgaggatctcatccgttatggatac
aactaccagggcaaagactatgtcacctcaggaatcactggggaaccgctggaagcttat
atctactttggaccggtgtattatcagaaattgaagcacatggtcctcgacaaaatgcat
gccagagcccgaggccccagagctgttctcaccaggcagcctacggagggccgctccaga
gacggagggctgcgtctgggcgagatggagcgcgattgtctgatcggctacggagcgagc
atgttactgctggagcgcctcatgatctccagtgacgcctttgaggtggacgtgtgcgga
cagtgtggcctgttggggtactctgggtggtgtcattactgtaagtcttcctgccacgtt
tcctccctgcgtatcccgtacgcctgtaagctgctgttccaggagctgcagtccatgaac
atcatcccccgcctcaaactgtcacgctacaacgagtga
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