Siniperca chuatsi (mandarin fish): 122876116
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Entry
122876116 CDS
T08948
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122876116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
NODP
Notch
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
122876116
NCBI-ProteinID:
XP_044051975
LinkDB
All DBs
Position
LG5:27920964..27968517
Genome browser
AA seq
2521 aa
AA seq
DB search
MHIFFVKLTFLLSLIALTRGLRCSTSTESCLNQGRCEGTPDGNGECKCQDGYLGSRCQFP
DPCVSSPCMNGGSCRVVSRGSTVDYSCTCRLGYTDRRCLTPINNVCISSPCRNGGTCELE
SLQTYKCRCPPGWSGKLCQQADPCASNPCANGGQCSAIESHYICTCTPFFSGKTCKQDVN
ECDANPSPCKNGGACINDVGGYRCQCPQEYTGKHCESRYLPCNPSPCHNGGTCIQKGETS
YECSCVPGFTGKNCNHNIDDCPGHGCQNGGTCVDGVNTYNCQCRPEFTGQLCTDDVDECQ
LMPNACQNGGTCHNTFGSYQCVCVNGWTGDDCSENIDDCASAACHQGSTCHDRVASFYCE
CPHGRTGLLCQLDDACISNPCQKGSNCDTNPVSGNHFCTCPSGYFGASCDQDVDECSLGS
NPCEHAGKCINTKGSFQCKCQRGYVGPRCELDINECMSNPCMNEATCLDQIGDFHCICMP
GYEGEFCEIDTDECANSPCLNNGKCIDKINAFHCQCPTGFTGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCECTEGYTGRHCETDINECYSDPCHYGTCIDGLASFSCHCNPGYTGRLC
ETNINECLSQPCRNGGTCQDRENAYICSCPKGTTGINCEINIDDCKSNPCDYGTCIDKIN
GYECACEPGYTGTMCNINIDECAINPCHNGGTCIDGINSFICVCPEGYHDATCFSQVNEC
LSNPCIHGHCDDKINGYKCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCILPYTGENCETLMAPCSSKPCKH
AGMCQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCRNGATCQNTLGSYRCGCKPGFT
GRNCETNIDDCKPNPCSNGGLCKDEVNGFLCTCLPGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGSCVDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCPHGYTGLNCQNLVRWCDSSPCKNAGTCWQRGTT
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNVHYCHCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCMPGYVGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINMDDCNPFIDPVTKEPKCFNKGKCVDRVGGYHCICPSGYV
GERCEGDINECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQHCDMVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSTCEYDAQACGSLHCRNGGTCISGHKSPKCLCTPSFTG
PECQYPTDSPCNSNPCYNGGTCEYTSEAPYYHCVCPTNFNGLRCHILDYSFQGGFGHDIP
LPSEVDNVFCDIPQCTEAKHNKFCDVHCNNHACGWDNGDCSLNFDNPWKNCSASLQCWRY
FNDGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADSHCDQGCNNAECEWDGL
DCANNMPEKLAMGQLVLVVHINPEQLLNNSFGFLRELSRVLRTNVIFSKDAKGEMMVYPY
YGNEHELKKYNVKRSVDTWAEVPGKVLNVVKRSLYDVAGGSRRIRRELDHLQIKGSVVHL
EVDNRQCFQQSTECFQSTNDAAAFLGALASSGKLDVPYTIEAVFSGVDPDPPQDPYPIYL
VLGGVGILAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKN
TSDISLMDDAQNEWEEDEPSDAKRFRQFDEQAVLEVGDQTDHRQWTQQHLDAADLRIPSI
APTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQG
ANLHNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVF
QILIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAA
VNNVEAAIVLLKNSANKDMQNNKEETPLFLAAREGSYETAKVLLDHFSNREITDHMDRLP
RDIAQERMHHDIVRLMDEYNLVRSPHMHGGSLSTTLSPPLCSPNGYLGGMKQPQPQGQGQ
SKKARKPSTKGIGCKEGKDMKVKKKNSQDGKSGNLLDSSAVLSPVDSLESPHGYVSDVAS
PPMMTSPFQQSPSVSLNHLQGMSDPHLAVNHMVMPNKQELARMQFDPLPPRLTHLPVSGS
SGQGAINGQCDWLSRMHGNMSQPGQFNPMRGAPGSQGGLHQGGQHGMMTSLHNGHPTTSL
SQMMNYQGIQSTRLGPQPHIMQQQAQQMQQMQNLQQLQQQQQQQQSIQLQHQNSSTTSSQ
NFISGELSSPELQQGTGNSSMPIHTILPQETQIMPSSINQSMPSTQFLTPPSQHSYSGPM
DNTPNHQVQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSMQSQIGHIPEQF
K
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgtgaaactaactttcttgttgtcgctgatagcactaacacgaggt
ctaagatgctccacgtccacggagtcgtgtttgaaccaggggaggtgtgaaggaactcca
gacggcaatggagagtgcaagtgccaggacggatacttggggagcaggtgccagtttcct
gacccgtgcgtctcctcgccatgcatgaacggcggctcgtgtcgtgtcgtgtccaggggg
agcacggtggactacagctgcacctgcaggctgggctacaccgaccgccgctgcctgacg
cccatcaacaacgtgtgtatcagctcgccgtgtcgcaacggaggcacctgcgagcttgag
agtctccagacgtacaagtgccgctgcccgcctggatggtcaggtaaactgtgccaacaa
gccgacccctgtgcctcaaacccgtgtgccaacggcggccagtgctccgccattgagtcc
cactacatctgtacctgcacgcccttcttctccggaaagacctgcaaacaggacgttaac
gagtgcgatgcgaacccgtcgccctgcaagaacggtggggcgtgcatcaatgatgtcggc
ggctaccgatgccagtgcccgcaggagtacacgggcaagcactgcgagagccgctacctg
ccctgcaacccatcaccgtgccataatggaggcacctgcatccagaagggagagaccagc
tatgaatgctcctgtgtgccaggttttacaggaaaaaactgcaaccacaacattgatgac
tgtccaggtcatgggtgccagaacggagggacatgtgtagatggagtcaacacctacaac
tgccagtgtagaccagaatttacaggtcagctctgcacagatgacgttgatgagtgccag
ctgatgcccaacgcctgccaaaatggcggcacgtgccacaacaccttcggcagctaccag
tgtgtgtgtgtgaacggctggactggggacgactgcagtgagaacatcgatgactgtgcc
agtgctgcatgccaccagggatccacctgtcatgaccgcgtcgcttctttctactgcgaa
tgcccccatggccgcacaggactgctgtgccagctggacgacgcctgcatcagcaaccct
tgtcagaaaggctccaactgtgacaccaaccccgtcagtggaaatcacttctgtacctgc
ccatcggggtacttcggggcttcctgcgatcaggatgttgacgagtgctcgctgggttcc
aatccatgtgagcatgcagggaagtgtataaacaccaagggttcgttccagtgtaagtgc
cagcggggttacgtggggccgcgctgcgagctggacatcaacgagtgcatgtccaacccg
tgtatgaatgaggccacctgcctggaccagataggagacttccactgtatctgcatgcca
ggttacgagggggagttctgcgagatcgatacagacgaatgcgccaacagcccctgcctg
aacaacggcaagtgtatcgacaagatcaacgccttccactgccagtgccccacaggcttc
actgggaacctttgccagatagacatcgacgagtgtgccagcacgccgtgcaaaaacggc
gccaagtgcacagacggacccaacaagtacacctgcgagtgcactgaaggttacactggg
aggcactgtgagacggacatcaatgagtgttactctgacccgtgccactacggtacctgc
attgacggcctggcctcattcagctgccactgcaaccctggatacaccggccggctgtgt
gagaccaacatcaacgagtgtctgagccagccgtgcaggaacggaggcacctgccaggac
cgagagaacgcctacatctgcagctgcccaaagggcaccacaggaatcaactgtgaaatc
aacatcgacgactgcaagagcaatccctgtgactatgggacctgcatcgacaagatcaat
ggctacgagtgtgcgtgtgaacccggctacacgggtaccatgtgtaacatcaacatcgac
gagtgtgccatcaacccctgccacaatggcggcacctgtatcgatggcatcaacagcttc
atctgcgtgtgtccagaaggttaccatgacgccacctgcttctcccaggtcaacgagtgc
ctcagcaatccctgtatccacggccactgtgacgacaagatcaatggctataaatgcctg
tgtgattctggctggagtggtaaaaactgcgacatcaacaacaatgagtgtgaatccaac
ccatgtatgaatggaggcacctgcaaggacatgaccagcggatatgtttgcacctgtcga
atgggcttcactggcccaaactgccagaccaacatcaatgaatgtgcctccaacccctgc
ctcaaccaggggacttgcattgacgatgtcgcaggctacaagtgcaactgtatcctgcct
tacacgggagagaactgtgaaaccttgatggccccctgcagctccaaaccctgcaagcac
gcggggatgtgtcaggagtcggaggactatcagagcttctcctgtgtctgtcctgaagga
tggcaaggccaaacatgtgaggtggacatcaaagagtgtgtgaagaatccctgtcgcaat
ggagcaacctgccagaacactttgggcagttaccgctgtggctgcaaacccggtttcact
ggacgcaactgcgaaaccaacatcgatgactgcaagcccaacccctgcagcaacggaggc
ctctgtaaggacgaggtgaacggcttcctgtgtacctgcctgcccggctttcggggcaca
aagtgcgaggaggacatcaacgagtgtgagagcaacccatgcaagaatggagccaactgc
accgactgtgtcaacagctacacctgtacctgcccgcccggcttcagtggaatccactgt
gaaaataacactcccgactgcactgagagctcctgcttcaatggcggtagctgtgtggac
ggcatcaacaccttcacatgtttatgcccgccgggcttcaccgggagttactgccagcat
gacatcaacgagtgtgactccaaaccctgtctgaacggcggcacctgccaggacagctac
ggcacctacaagtgtacctgcccacatggttacaccggactcaactgtcagaacttggtt
cgttggtgcgactcatcaccctgtaagaacgcgggaacttgctggcagaggggaaccacc
tatagctgcgagtgtgagactggctggacgggcctttattgtgacgtcccaagtgtctcc
tgtgaggtggcagccaaacagagaggagtcgatgttgcccatctgtgtcgtaactctggt
cagtgtctagacgcaggaaacgttcactactgccactgccaggttggatataccggaagt
tactgtgaggagcaggtggacgaatgcaccccaaacccgtgccaaaacggagccacctgt
actgactttttaggtggatacacctgcaagtgcatgccaggatacgtggggactaactgc
tctgacgagatcaatgaatgtttctcccagccgtgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccccggggaacccaaggtgtgcactgtgagatc
aacatggacgactgcaacccattcatcgacccagtcaccaaagagcccaagtgtttcaac
aaagggaagtgtgtggatcgagtcggcggctaccactgcatctgcccttcgggatacgta
ggggagcgctgcgagggagacatcaacgagtgtctgtccaacccctgcgacccgcggggc
acgcacagctgcatccagctcaccaacaactaccgctgcgagtgtcgcaccggatacaca
ggtcaacactgtgacatggtgtttgatggctgtaagggaaaaccgtgtcgcaatggaggg
acctgtgctgtagccagtaacaccccacatggtttcatctgcaaatgtcctcctggcttt
actggctccacgtgtgaatacgatgcccaggcctgcggtagcctccactgccgcaatgga
ggcacctgcatctccggccacaagagtcccaagtgtctgtgcaccccgtccttcactgga
cctgagtgccagtatcccaccgacagcccctgtaattccaacccctgctacaacggtggc
acatgtgaatacacctctgaagcgccgtactaccactgcgtctgccccacgaacttcaac
ggtcttcgatgccacatcctggattacagcttccagggagggtttggccacgacatccca
ctgccgtcggaggtggacaacgtcttctgcgatatcccgcagtgcacagaagctaagcac
aacaaattctgcgacgtgcactgtaacaaccacgcatgcggctgggacaacggtgactgc
tcgctcaacttcgacaacccgtggaagaactgctctgcctcgctgcagtgctggcgatac
ttcaacgatggaaagtgcgattcacagtgtgacaacgctggatgtctctacgatgggttt
gactgccagaatctggaaggacagtgcaatcctctgtatgaccagtactgcaaggaccac
tacgctgacagccactgcgaccagggctgcaacaatgctgagtgcgagtgggacggcttg
gactgtgccaataacatgcccgagaagctcgccatgggccagttggtcctggtggtccac
atcaaccccgagcagctcctcaacaactctttcggcttcctgcgagagctaagccgcgtc
ctccgtaccaatgtgatattcagtaaggacgccaagggcgagatgatggtatacccgtac
tacgggaacgaacacgagctgaagaagtacaatgttaagcgctcagtggatacttgggca
gaggttccaggcaaggtgctgaacgtggtgaagaggagcctgtatgatgtggcaggcggc
agcaggagaattaggagggagctggatcacttgcagatcaaaggttcagttgtccacttg
gaggtggacaaccgtcagtgcttccagcagtccactgagtgtttccagagcaccaatgat
gctgcagctttcctcggggctttggcctccagtggcaaactggatgttccctacactatt
gaagctgtttttagcggtgtggaccccgaccctccacaggacccctacccaatctacttg
gtcctgggcggcgtagggatactggccttcctcggagttgggatggtggctgcccgaaag
cggcgccatgagcacgggcgcctctggctccccgaaggcttcaagaccacagagactagt
aagaagaagagacgtgagcctgtcggagaggattcggtgggattaaagccactgaaaaac
acctcagacatttcgctcatggatgacgcccaaaatgaatgggaagaggacgagccttca
gatgccaaacgcttcaggcagtttgacgagcaggctgtactggaggtgggcgaccagacg
gaccaccggcagtggacgcagcagcacctggacgccgctgacctgcgcatcccctccatt
gctcccactccccctcagggcgagattgagaatgactgcatggacgttaatgtccgggga
ccggatggattcacaccgctgatgattgcatcctgcagtgggggaggtttagaaacaggc
aacagcgaggaagaagaggatgcctctgccaatgtgatcaatgacttcatctaccagggc
gctaaccttcacaaccagactgaccgcacaggtgaaaccgctcttcacctggctgcccgc
tacgctcgctctgacgctgccaaacgtctgctggaggccagcgctgatgccaacatccag
gacaacatgggcaggacgcctctgcatgctgctgtggcagctgatgcccagggggtgttc
cagattctgataaggaaccgcgccacagacttggatgcccgcatgcatgatggcactaca
cctctgatcttggctgccaggctggcagtggagggcatggtggaggagctcataaactgt
catgctgacgtcaatgcaatcgatgactttggtaaatcagctctacattgggctgcagca
gtaaataacgtggaggctgctattgtgcttctcaagaacagtgccaacaaggacatgcaa
aacaacaaggaggaaacccctctattcttggctgccagggaaggaagctacgagactgcc
aaggtcttactggaccacttttccaacagagaaataactgaccacatggaccggttaccc
agagacattgcacaggagagaatgcatcacgacattgtgcggctaatggacgagtacaac
ctggtacggagtcctcacatgcacggagggtcactcagcaccacgttgtcgccccctctc
tgctcgcccaacggctacctgggcggcatgaagcagcctcagcctcaaggtcaaggccag
agcaaaaaggcacgcaagcccagcaccaagggcatcggctgcaaggagggcaaagacatg
aaggtaaagaagaagaattcgcaggatgggaagtctgggaacctcctggacagctcagcg
gttctgtcacccgttgactcgttggagtctccccacggctacgtctctgacgtggcctca
ccgcccatgatgacctcgcctttccagcagtcgccgtctgtatcgctgaaccatctgcag
ggtatgtctgacccccacctagctgtaaaccacatggtgatgccaaacaagcaggagctg
gcccgaatgcagtttgacccgctgcctccccgtcttactcatctgcccgtgtctggctcc
agtggccagggcgccataaacggccagtgtgattggctgtccaggatgcacggcaacatg
agccagccaggtcagttcaaccccatgagaggagctcctggtagtcagggaggtctgcat
cagggagggcagcacgggatgatgacctccctccacaacggccaccccaccaccagcctg
tctcagatgatgaactaccagggaatccagagcaccagactgggcccacagccccacatc
atgcagcagcaggctcagcagatgcagcagatgcagaacctgcagcagctccagcagcag
cagcagcaacaacagagcatccagctgcagcaccagaactcaagcacgaccagcagccag
aacttcatcagcggggagctcagttctccagagctccagcagggcacaggcaactccagc
atgcccatccacaccatcctgccgcaggagacccagattatgccttcctccatcaaccag
tcaatgcccagcacccagttcctcaccccaccttcccagcacagctattcaggccccatg
gacaacaccccaaaccatcaggtccaggtgccagaccacccctttctgaccccctctccc
ggctcccccgatcagtggtcaagttcttctcctcattccaacatgtccgactggtcagag
ggcatttcaagtccaccgacaagcatgcagtctcagattggacatatacctgaacagttc
aaataa
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integrated database retrieval system
