Siniperca chuatsi (mandarin fish): 122877525
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Entry
122877525 CDS
T08948
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122877525 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122877525 (tprb)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122877525 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
122877525
NCBI-ProteinID:
XP_044055120
LinkDB
All DBs
Position
LG6:9497692..9523449
Genome browser
AA seq
2362 aa
AA seq
DB search
MAALLLQELEASELSKLPKTIQNKLERILSDQQYEIDSLKAQQEQFRVDSEQHFFEKVKR
LAQCQEEFLSQTQEHLKLKEEFTKLDEELKSVREKNREYESAQERLSSEQTLLSKAKLEL
EAEKRELVRTLERRSVEVEHLNDDFRQLNDKLVEVNTSKMALQMKLDELESAEVNIKYKE
KRMEQEKVLLHGQTSWLNEELKAKSEELLSLSRQKGNQILELKCNLENKEDELNRLQDQV
GSLKTSNEHLQKQNEDMISKLKEAKEQHATMEEKFRNELNANIKLCNLYKGAAADSEAKS
EELNRAVEELHKLLKDAGEANKDLEEKLQEMNGATDKSVAELKERIQGLEKELDNANELL
SSSKLRGPVGTTSVLTEEQMITMSPTAAAVSKIKPGMKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVQEVHRLQKEADEAN
KRSSVLERESQRCELQLGDMAQQVRVLLIELEEARGNHVVHEEEVSSADVSSTSEVISQH
LVTFRSVEELQQQNQRLLVALRELSDAQEREEFEATGNKRGELEHSLEKAQVELESLKEQ
RSQQVKMTESIVRQRDMYRVLLAQATGVSFPQQGTQSEEFSLTSTPRRSPAAIPTTGTPT
ALVSMATESAEALEAKAALRQLQEVFSTYKKERVESDKALTEQNEKLQEQLSVLHSQNAK
ISTQLEFASKRYEMLQDNVEAYRKEIASLREKGQKMATATQKHEQTIHTLNEDLRAAKEK
LAMAEGRAESLRKERDMLKLVESRLNQEKETILSQQQTQNVLLTNLQAIQATLERSETDT
RQRLNSQLEKQERDISQLQKRLEHEVEQRHLLSRNQEIQLMEAKRQLETQVVLHQKTKEL
LNAAELELNTLRLQQGTSEARHTLSSPSTPIRGMQGSDQDREDLQGRLRLAETRAEELAE
NLRAATSSMKQYRAMAQSLEESLDKEKQVTEQARSSIEARMMEAEKQHRRLEEKLLEAEK
EKQDLEEQKRRALASLEEQMNSLRSSLSSAQADHQAVLQQVAVAEAQQQQALQDSQEHAK
LAAEAQDKYEREMMLHAADVEALQAAKAQALQAIGLKHQLEERSQRVSAELLEARVSWEE
QEKILKEEMSKMESRYDELQRQNTLLHEQIQTMSSKMADKLQRAASENPMNISLTEDGKS
QDQVLEILRFVRREKEISESRFEIAQGESLRYRLRVEHLEQELKEAQDSLSAAKERMQVT
AKTLAQHDELMKKTETMSILMETNKMLREEKDKMEQELQQTQAKVQKLESDIMPLQQANS
ELSEKSGMLQAEKKILEEEVKRWKARSQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQLN
EESIRFKAEVARTNNLTTSLQSQIQNLRDSMNKITDERNTLKKDLDTKNQELQEKARTIT
QVKKIGRRYKTQYDELKVEHDKLVAEATAGPSQEEEARQASAQELQSLRDSLSQAEAKTR
ELEVQLENMNKVVTERETEGRNAQEQSSRLQTELARLRQELQDKVSQEDTLRQQMTEKED
KTRKAIVYAKQKISQLMGTKDQLQQENEELKQQREELEVRVSALKSQYEGRLSRQERKLR
DLQGQQERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKPTPAADRGSASTSEPPTANIKP
TPVVATASKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGP
PVEHVTVYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSVTHAEPANQ
EPPPVVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESATMVTDTEATQ
EDTSRAPIPKKLRIIQRVGPEEEVLVEDSSEAEGMVPTDTQDGETSQTEEFPALEEGDEG
AASQSVMMDQEVTLTQSDTPDQVEQEVIIIVTDTESEDDQEEEDEEEEEQDYEEEEEEEE
EEEEEEDEEEEDDGEMGEEGEDSNEGSGDGNEAYEGDDTEGADVTDPGTETEESLGASDS
TQRPADSQTPCFEGSTMDAFSTEQPITSSGTRMPQSPRRPTHQLPPRLNIHPAPASELGP
PAQVQRIPVRRVPQLTSGVPGSTQQFFDDDDRMVPSTPTLPHRSDSFDQAIHSPQVAGVP
RFRFGPSDDMPQTSSSSHSDLGHLASQGGLGMYESPLFLATHEEESGGRSVPTTPLQVAA
PVTVFSDGAQSDATEHASQSVPMVSTSTPGLVVPGAAGTGEERDDVFLEPDTDRSSAEVS
VDPVVSQGDIEEPSQPSDKASLPSTSQEPSSSSADTSSASPKPSRPGPSRQLQRWPEHRG
GRMKRGGQGFPSRGVHGRRFVR
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaagagttggaagcttccgagctatctaagttaccaaaaaca
attcaaaacaaactcgagaggattctttcggatcagcaatatgaaatcgattctttgaaa
gcacaacaggaacaatttcgggttgacagcgagcaacatttctttgagaaagtgaaacga
cttgctcagtgtcaggaagaatttctgtcccagactcaagaacatctcaaactcaaagag
gagtttaccaagcttgacgaggagcttaaaagtgtgcgtgagaagaatagggaatatgaa
tccgcccaagagaggttgtcatcagagcagactttgctgtcaaaagccaaattggaactg
gaggcagagaagcgagagcttgtgcgaacactggagaggagatctgtggaagtggagcat
ttaaatgatgacttcaggcaactcaatgacaagttggtggaagtcaacacctctaagatg
gcactgcagatgaagttagatgaacttgaatcagctgaagtcaacattaaatacaaggag
aagcgtatggaacaggagaaggtgctgctgcatggccaaacatcttggctgaatgaagaa
ttgaaggctaagagtgaggaactgctgtccctgtcccgacagaagggaaaccagatcctg
gaactgaaatgcaacctggagaacaaggaagatgagttgaacagactccaagaccaagtt
ggcagtttgaagacttcaaatgaacaccttcagaagcagaatgaggacatgatcagcaaa
ctaaaagaagccaaggaacaacacgccaccatggaggaaaagttcagaaacgagctgaat
gccaacattaagctttgtaatctatacaagggagcagcagcagattctgaggcaaaaagc
gaagagctgaatcgggcagtggaggaactgcataagctactgaaggatgctggagaagcc
aacaaggaccttgaggagaagttgcaggagatgaatggtgccacagacaagagtgtagct
gagctaaaggagaggatccagggtcttgagaaagagctggacaatgctaatgagctgctg
tcaagttctaaacttagaggccctgtcggtacaacatctgtgctcacagaggagcaaatg
ataacaatgtctccaacagcagctgctgtatccaagataaagcccggcatgaagctgaca
gagttgtatacagcatatgtggagagccaggagcagctgcagttggagcgattggagaac
aagcgggtcaataaatacctggatgacattgtacaggaagtggaagcaaaagcccctatc
ctcaaacggcaaagggatgaacatgagcgcatgcagaagtcagtggccagtctttctgcc
aagctggagcaggctgttcaggaggtgcaccgtctgcagaaagaagctgatgaagctaac
aagcgctcctctgttctggaaagggaaagccagaggtgtgaactgcagctgggagacatg
gctcagcaggtgcgtgtgctgctgattgagctggaagaggctcgtggaaaccatgtggtt
catgaagaggaggtgagctcagccgacgtcagcagcacgtcagaggtgatcagccaacac
ttggtgaccttccgcagtgtagaggagctacagcagcagaaccagcgtcttctggtggcc
ctcagggagctcagtgatgcccaggaaagagaggagtttgaggcgactggcaataagcgt
ggtgaactggagcacagtttggagaaagcccaggttgagctggagtccctgaaagagcaa
cgcagccaacaggttaagatgactgagtccattgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaaccggagtaagcttccctcagcaaggtacgcaatctgaggagttc
tcccttacctccaccccacgacgctcacctgcagccattcccaccacaggaacgcccact
gcactcgtctccatggcaacagagtctgctgaagcattggaggccaaggcagctttgcga
cagttgcaagaggtattctccacctataagaaagagcgtgtggagagtgacaaggcactg
actgagcagaacgagaagctccaggagcagctctctgtcctccactcccagaatgccaag
atatccacccaattggagtttgcctccaagaggtatgagatgctgcaggacaacgttgag
gcctacaggaaagagattgcttctctcagagagaaaggacagaagatggctactgccaca
cagaagcatgagcagaccatccacactttgaatgaagatctgagagctgccaaagagaaa
ctcgccatggctgagggccgtgctgagagcctgcgtaaggagagagacatgctgaagctg
gtggagtccaggttgaatcaggagaaagagacaatcctgagccaacaacagacccagaat
gtgctgctgaccaacctccaggccattcaggccactcttgagcgttcagagactgataca
cgtcagcgtctaaacagccagttggagaagcaggaacgagatatctcccagctccagaag
aggctggagcacgaagtggaacaacgccacctgctcagcagaaaccaggaaatccagttg
atggaggcaaagaggcagcttgagacacaggtggttttacaccagaagaccaaggagctg
ctgaatgctgccgagttggagctcaacaccctcaggctgcagcaaggcaccagtgaagca
cgtcacaccctgagctccccctccacacccatcagaggcatgcagggttcagatcaagac
agagaggacctacagggccgtctgcggctggctgaaacccgggcagaggagctggcagag
aacctcagggcagccacctccagcatgaagcagtacagagccatggctcagagcttggag
gagtccctcgacaaagagaaacaggtaacagagcaggcacgctcatccattgaagctcgt
atgatggaggctgagaagcagcaccgcaggctggaggagaagcttctggaagcagagaaa
gagaaacaagatttggaggagcagaagaggagagccctggcttctctggaggaacagatg
aacagtctaaggagcagtctcagcagtgcccaggcagatcaccaggcggtgctacagcaa
gtggcagtagctgaagcccagcagcagcaagctctacaagacagccaggagcacgctaag
ctggcagctgaagcacaagataagtatgagcgggagatgatgctgcatgcagcagacgtg
gaggccctgcaggctgctaaagctcaggccctacaagccatcgggctcaaacaccagctg
gaggagagatcccagagggtcagtgcagagctactggaggccagggtctcctgggaggag
caggaaaagatcctcaaggaggagatgtccaagatggagagccgctatgatgaattgcag
cggcagaacaccctcctgcatgagcagatccagacgatgagcagcaagatggctgacaaa
ttgcaacgtgctgccagtgagaatcccatgaacatctccctgactgaagatggcaaatct
caagaccaagtccttgagattctcaggtttgtacgtcgggagaaggagatttcagagtct
cgttttgagattgcccaaggggagagtttgcgttaccgtctgagggtggagcacctggaa
caagagctgaaggaggcacaggacagcttgagtgccgcaaaggagaggatgcaggtgaca
gcgaagaccctggctcagcatgatgagctgatgaagaagaccgaaacaatgagcatcctg
atggagaccaacaagatgctgagagaggagaaggacaagatggagcaagaactgcagcaa
acccaagctaaggtacaaaagctggagtcagacatcatgccactgcagcaagccaactct
gagctgagcgagaagagcggtatgctgcaggcggagaagaagatactggaagaggaggtc
aagcgctggaaagctcggtcccagcatttggtgagccagcaaaaagattcagatccggaa
gagtacaagcgtctgcactctgaaaaggaggcacatctcaaacgcattcagcagctcaat
gaggagagcatcagatttaaagcagaggtggccaggaccaataatctaacaacatctctg
caaagccagatacagaacttgcgtgacagtatgaataaaataactgatgagaggaatacg
ctgaaaaaggacctggataccaagaaccaggaactccaggagaaggcgcgaactatcacc
caggtcaagaagattggacgccgttacaagactcagtatgatgaactcaaggtggaacat
gacaagttggtagctgaagccacagcaggcccatcccaagaagaggaggcacgtcaagcc
tcagctcaggagctgcagagcctcagagattctctgagccaggccgaagccaagaccaga
gagctggaagtacagcttgagaacatgaacaaggtggttacagagcgtgagactgaaggg
cgtaatgcccaggagcagtcctccaggctgcagacagagctggccaggttaaggcaggag
ctgcaggataaagtttctcaggaagacacgctgagacagcagatgactgagaaggaggat
aagaccaggaaggccatcgtttacgccaagcagaagattagtcagctcatgggcaccaaa
gaccagctgcagcaggaaaatgaggagctaaagcaacagcgtgaggagctggaggtgcga
gtgagcgctctcaagtctcaatacgagggccgcctgagtcgacaagagagaaaactgaga
gacctgcaaggccaacaggagagacaagagcagagagacgagccacctgaggcaggtccc
agcaagacccaggagcagcagaggagcacagaacagagacagatcagtctgaagccaacc
ccagctgcagacaggggcagtgccagcacatctgagcctccaactgccaacattaagcca
acacctgtagtggctacagccagcaagcagcctgtcaatccggggaacaaacccactcca
agagcaagcatcaggcctatgatcaccccagccactgtacccaccccaacacccacggct
actgtcatgcccaccacacaggtggagacccaggaagcaatgcagtctactgaaggccca
ccagtggagcatgtgactgtgtacggcagtgctagcggctcggtgcgctccgccagcccc
aacgtccagaccactttagctagccccatgctgactgtgcagcagacccagacacaagcc
acagcatttgtccaaccaactcagcaacagagcgtgacccatgcagagccagccaatcag
gagccacccccagtggtcattgaggcaacacctagctcacaggtggaatggccttcaacg
tcttccacctcctctgtgtttgggactgtttcagcaacaccaggaacctcttccatgtcc
aagaggcctcgtgaggaggaggagagcgccacaatggtcactgacacagaggccactcag
gaggatacctccagggctcctatacctaaaaagctgcgcatcatccaaagagtgggccca
gaggaggaggtgctggtggaggacagttctgaggctgaggggatggtgccaacagacaca
caagatggtgaaacaagccagacagaggagtttccagcactggaggaaggagatgagggt
gcagcctcccagtctgtcatgatggaccaagaggttaccctgacccaaagtgacacccct
gaccaggtggagcaggaagtaatcatcatagtaacagacacagagagtgaggatgaccag
gaagaggaggatgaagaggaagaggagcaggactacgaggaagaggaagaagaggaagag
gaagaagaggaggaggaagatgaagaggaggaagacgatggagagatgggggaggaagga
gaggacagtaacgaggggagcggtgacggcaacgaggcttacgagggagacgacacagag
ggagctgatgtaacagatccgggcacagagacggaggagagtttgggagcgtctgactcc
acccagaggccagcagattcccagacaccctgcttcgagggcagtacaatggatgccttc
tccacagaacaacctatcacaagctctggtacaaggatgccccagtcaccacggagacca
acacatcagctgccccctcgcctgaacatccaccccgccccggcatcagaactggggcca
cctgctcaggttcagcgtatccccgttcgtcgcgtccctcagctcacttccggggtgccg
ggcagcactcagcaattctttgatgatgatgacaggatggttcccagcactcctactctg
ccacaccgctccgatagttttgaccaggccatccattctcctcaagtggctggtgtgcct
cgcttcaggtttggtccttcagatgatatgccacagaccagctcctcctcgcactctgac
ctgggacatctcgcgtcacaaggaggtcttgggatgtatgaaagccccttgttcctagca
actcatgaagaggagtctggtggacgcagcgttcccactacaccgttacaagttgcagca
ccagtaacggtattctcagacggggctcagtctgacgccactgagcacgcctcccagtca
gttcccatggtgagcacgtccacaccaggcctggttgtgccaggagcagccggcacaggg
gaggagagagacgacgtcttcctggagccagacactgataggtccagtgcagaagtgtca
gtggatccagtggtctcacagggagatatagaggagccaagccagccatctgacaaggcc
agcctcccctccaccagtcaggagccctcctccagctctgcagatacaagcagtgcttca
cctaaaccctctagacctggacccagtagacagctgcagcgctggccagaacaccgtggt
ggccgcatgaagagaggaggtcagggatttccttctcggggtgtacatgggagacgattc
gtgagatga
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integrated database retrieval system
