Siniperca chuatsi (mandarin fish): 122878436
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Entry
122878436 CDS
T08948
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03440
Homologous recombination
schu04068
FoxO signaling pathway
schu04110
Cell cycle
schu04115
p53 signaling pathway
schu04210
Apoptosis
schu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122878436 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122878436 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122878436 (atm)
04210 Apoptosis
122878436 (atm)
04115 p53 signaling pathway
122878436 (atm)
04218 Cellular senescence
122878436 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122878436 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122878436 (atm)
03036 Chromosome and associated proteins [BR:
schu03036
]
122878436 (atm)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122878436 (atm)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122878436 (atm)
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: Other
PIKK family [OT]
122878436 (atm)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122878436 (atm)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122878436 (atm)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
Check point factors
Other check point factors
122878436 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
Motif
Other DBs
NCBI-GeneID:
122878436
NCBI-ProteinID:
XP_044057149
LinkDB
All DBs
Position
LG7:complement(11148162..11175304)
Genome browser
AA seq
3091 aa
AA seq
DB search
MSLAFHELLVCCRGLENDKATERKKEAERFRRLLRSPEVVQELDRTSGPKAKGSKQLTWD
AVFRFLQRYVQKETESMQSSKSNVTATTLATRQKKMAEMCSLIKYFIRYANKRGPRLKCS
ELLKHVMEVLQSSYSCTAYGEDYTSLLVKDILSVRKYWCDITLQQWHSLLDLYCGFFNSS
SKSINRVLVSRVIHTVVQGCCMQTDGFNNTLFSFFSKALLNARQEHLTVLEHLVSALNIF
LRSAAMNCRMRVCHLGEELLPSILYVWADMRPSAALKEEIVDFFNLQICAHHPKGAKTQD
TGAHAEDWTRWRNLLYNLYDASIREISNIGSRGKYVTGARHIAVKDNLIELTADICHQLF
SDDNDTHVLEVTQASLRATHMGSPTHGTASKRRRIELGWEVLRDHLQPQQNDFDVIPWLQ
ITAVLTSKYPSMVPSQELVLLLSVLYQLLTEQRKGERGPYVLRCLREVARCQARYPERAQ
IHRMELGRLWGRVWALALRGVSSPQTEALSLDLLSSIVHGGLINMDREFWKLFSASACKP
SQGAALCLAQALLKCPVPKSLISSSGWDHVGVTEGSASPNLKETLIAWLLMTDQSDEMED
SSRPHPIICRDFPYNLIGNILVSMTLKDTRTGLKFLLGTEGVESAFFQEKNSSNVKDNLE
EIERLYLQFSFNTLPSATRGTDESVKMTSADGQFSAVPGLRNKLEQSLLCVADNLLNCYS
PDSQSTPPECLVRCFSLLIGVLAGYVSTGFLTEEEACCSQLFTKAKALAQDFSGFVSSVK
VKMTEEGAMSTLRSVMKLCTQSASREKKDNVCPISSSLFIMILPASLLSELAEICKLLLS
SVSKRVSVVDEDDHMDDDWDMSRTQQGDNIDLFDDGEESHCSTNGTQRQKGDNSDTSCGP
GAKSLLADDHLAHQDLALLAVLEFLCECGSVQPIHGLLFKPQEVRRRLLLLVEQIDFSKA
LHLSMYLVLLKKLPAEDSLSPEEFDSLLRPLADLCSLYRQDQDICAAVLLGLLPSIRNLG
KTHHVPEEMRHVQGSLLQVVSGFCFLIQTGKCMAAVRAALVQCLVALLEADPCCKWAVLS
IRGPDREEDHPVSAILPSHLADAHHQVRMLVAMSIERLFLEMRPEQPDKRKMLPLKHQQA
AFETIYLKAQEGMRLPKSSSSEDQQDESFNRKATLLKSLSVILRCSPVCEKQSLFALFQS
YKENNIEEQLIKKMLCCVSRALGYRSVKTFVSSHLYYLVAEWLAQRQSDDRYTLGSFPYT
LLDHNTVKDFYNSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWRGLLADCFPKIMVNILPY
FALSGQDAQVAQQREKAHRVYDLLKDANCLGKQQIDNLIHSNLADIVVELLMTLYEESGA
EGDREDLKRFIGELDPAPNPPYFSSYVIKATLDYLSKCHSANHKSLVAILSKTPISIQRI
LLAVCERAAETTNSYERHRILLMYHLFVNLLLREVKDSLGGAWAFVLRDIIYTLIHHINS
RSVQCDEVSNRSLSLCCDLLTSVCQVALRFCDDALDCHLQAIVGTLTAQVASRPAISQQV
LSLLQFLVIENQQKLKGAISRLEPFPDLPEFRELRSVRHILKYITGTFTLRQEITHFLSV
TSCDSLPLTRLEGLKELTRQLHVNKGQFRELLKECHADPTDSVLVKLVLSLLQLCKLAAN
HPGGADILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAVSLFASTESQCLYIILNCMND
ALTQQRIEVRKAAAECVTSILATQSGVDFWEQHKDNRDPMLAYLNPFRKAKKNVAAVAAE
ESSEAREKLESQEFWIPQAGSHKAWLKALCTALLDSGGVRSEALLLSRPLCLVWVDCCQR
LLPLIIHSILLDDSNGSWRDLLSSHIQNFFSFCSRSAQASSRSATPLNSDSESDTASQGL
HDKTSLRTMLAVIDYLRHQQRPLEADSNSCGTVCDSNFWLELNYLEVAKAAQSCSAHFTA
LLYTEIYVDKIKSNMEESRRTKSRATRRINFEENSQNFTISSLTEKSMEDTKISLQELLI
EVYRSIGEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLYSTLPEVTRQVGIVE
GLQNFGLSSILATYMRGLESEGVEWGAELRELRFQAAWRNTQWDCELPERSEKSIPGYHE
SVFCAMQALRDKEFSIFDETMKQARGAEVEELCRGSLEAVSSLYPALRNLQSIRELESVK
QLFSRPFSDVTLREVCSHWRQHSQLLADSDFALVEPILAIRSVSQHTLMSRVGDPDSIQY
LSSMLTDHLMELCRLACKAGNTQLAERAVFQMKQQGGGGSWAPSPVSSWQLEEAQVFWAK
GEQGLALGLLRQMINNLEEKVDLNPALAPVYTECLRLCGNWLAETCLESPGVILEKYLER
AVEVIKGESGVQDSRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKKE
VDLIKEHNVSNRYTIKVKKELQLDETALSNLQEDRQRFLCKAVENYIQCLEQGEEHDTWV
FRLASLWLENANVKAVNDMMKKGVKQIPSYKFLPLMYQLAARMGTKMANGIAEDTGFHDV
LIDLIYQASLQHPHHTLFIILALVNANKDENFCSSRLSKSAPRLTSQFDLERSDVARKII
SAIRKKRGEMIRGIERLCDAYITLAYMDVSKHKTEKKAIPIPADQPIMQIKDLDEVVIPT
MEIKVDPSGCYDNLVTVRSFMPQYHLAGGVNLPKIIDCVGSDGKSRRQLVKGRDDLRQDA
VMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPNKG
AHKRFRPRDWTNLTCRKKMMEAQRLPFDEKLQAYSEVCKSFRPVFRYFCMERFLDPAVWM
EKRLAYTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETV
PFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLK
AFYLQHDEQQELNATLNSTIGGDDIDNHRKSSDSQSFNKVAERVLLRLQEKLKGVEEGTV
LSVGGQVNLLIQQAMDPKNLSSLFPGWQAWV
NT seq
9276 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttttcatgagctcctggtgtgctgcagggggctggagaatgacaaagct
acagagaggaagaaagaagctgaacgcttcagacggctccttcgatctccagaggttgtg
caggagttggatcgtacctcaggacccaaagctaaaggctccaagcaactcacatgggat
gctgttttcagatttctgcagcgttatgtccagaaggaaacagaaagcatgcaatcaagt
aaatccaacgtcacagcaacgacgctggccacgcgtcagaagaagatggctgaaatgtgc
agcttgatcaaatacttcattcgctacgcaaacaaacgcgggccccgtctgaagtgcagt
gagctgctgaaacatgtgatggaggtcctgcagagttcatacagctgtacagcctacgga
gaagattacaccagcctcctagtaaaggacatcctctctgtccgcaagtactggtgtgac
atcactctacagcagtggcacagtcttttggacttgtactgtggcttcttcaactcttcg
tccaagtccatcaaccgcgttttggtgagcagagtcatccacacggttgtgcagggctgc
tgcatgcagactgatggattcaacaacactctgttcagcttcttctccaaagcactgcta
aatgccaggcaggaacacctgactgttctggagcacctcgtctcggctctcaacatcttc
ttgagatccgcggccatgaactgtcggatgagggtttgtcacctgggagaggagcttctg
ccttctatactgtatgtctgggcggatatgaggcccagtgcggctctcaaagaggagatt
gtggatttctttaacctgcagatttgtgcccaccaccccaaaggagccaagacgcaagat
acaggtgctcatgctgaggactggaccaggtggcggaatctgctgtacaacctgtatgat
gcctcaatcagagaaattagcaatataggcagcagagggaagtacgtcacaggggcccga
cacatagctgtcaaagacaatctcattgagctcacagctgacatctgtcaccagctgttc
agtgacgataatgacacccatgtcttggaggtgacccaggcctccctcagagccacccac
atgggcagtcccactcatggaacagccagcaagcgacggcgaatcgaactaggctgggag
gtcctccgggaccatctgcagcctcagcaaaatgattttgatgtcataccatggctgcag
atcaccgcagtgctcacctctaagtacccgtccatggtgcccagccaggagctcgtcctg
ctgctgtcggtgttgtaccagctcctgacagagcagcggaaaggagagagggggccatat
gtgctgcgctgtctgagggaggtggcccggtgtcaggcccgctacccagagagggcccaa
atccacaggatggagctgggcaggctgtggggtcgggtgtgggccctggcactgcgaggg
gtcagctcaccccagacagaggccctcagcctggacctgctgagctctattgtccacggt
ggcctaatcaatatggacagagaattttggaagctcttctctgcatcagcatgtaaacca
tctcagggtgctgctctctgtctagcccaggccctgctgaagtgtccggtccctaaaagt
ctaatctcgagctcaggctgggaccatgtgggggtcacagagggatctgcatcacctaac
ctgaaggagaccctcatagcctggctgctgatgaccgatcagagcgatgagatggaggat
agctccagacctcaccccatcatttgcagagactttccttacaatctaatagggaacatc
ctggtctccatgaccttgaaagacacgagaactggcctgaagtttcttctgggtactgaa
ggagtagaaagtgcctttttccaagaaaaaaactcatccaatgtcaaagacaacctggaa
gagatcgagaggctgtacttgcagttcagcttcaacacactgccctcagcgacgcgaggg
actgacgagtcagtgaagatgacttcagccgatggccaattttctgccgtccccggcctc
agaaacaagctggagcaatccctgctttgtgttgcggacaacctactcaactgctactct
cctgattctcagtccacccctccagagtgtttggtgcgctgtttcagtctgctgatcggt
gttctagcaggttacgtctccactgggtttctgactgaggaggaggcctgctgctcacag
ctcttcactaaagccaaggccctggcccaggacttcagcggttttgtttctagtgtgaaa
gtgaagatgacagaggaaggagccatgagcacactgagatccgtcatgaagctctgcaca
cagtcagcaagcagggaaaaaaaggataatgtttgtcccatctcctccagtctgttcatt
atgattctgccggccagtctcctcagtgaactggctgagatctgcaaactgttattaagc
agtgtttctaagagagtcagtgttgtggatgaagacgatcatatggatgatgactgggac
atgagcagaactcaacaaggggacaacattgacctgtttgacgatggcgaagagtcccac
tgcagcaccaatgggacccagagacagaagggagacaacagtgacacttcctgtggacca
ggtgcaaaaagtctgttagcagacgatcatctggcccaccaggacctggctctccttgca
gtcttggagttcctgtgtgagtgcggctctgtccagcccatccacggccttctcttcaaa
ccacaggaggtgcggcgcaggctgctgctgctggtggagcagatcgacttcagcaaagcc
ctgcacctcagcatgtatcttgtcctgttgaagaagcttcctgctgaggactcgctctct
ccagaggaattcgattcactgcttcgtcctctagcggacctgtgttccttgtaccgtcag
gaccaagacatctgtgctgctgttctgctgggtttgttaccctccatcaggaacctgggg
aaaacccaccatgtgccggaggaaatgcgacatgttcagggatctctgctacaagtggtg
tctggattctgtttcctgatccaaacggggaaatgcatggcagctgtacgagctgcttta
gtgcaatgtctggttgccctgctggaggctgacccgtgttgtaagtgggcagtcctaagc
atcagagggcctgacagagaggaagatcatccagtgtcggccatccttccgtctcacctc
gcagatgcccaccaccaagtccgcatgctggtagccatgtccatagagaggttgtttctg
gagatgagaccagagcagccggataagagaaagatgctgccgcttaaacaccagcaggca
gcttttgagaccatttacctgaaggctcaggaaggaatgaggctcccaaaaagtagctct
tcagaggaccagcaggacgagtcatttaaccgcaaggccaccctgttgaagagtttgtct
gtgatactgcgctgtagcccagtctgtgaaaaacagtctctgtttgccctcttccagtcc
tacaaggagaacaatatagaggaacagctcatcaaaaagatgttgtgctgtgtatccaga
gcgctgggctacaggagcgtgaaaacatttgtcagttcccacctgtactacctggtagct
gagtggctcgcgcagagacagtctgacgatcgctacactcttggatctttcccctacacc
ctcctagaccacaacacagtcaaagatttctataactcttcctaccaggtattgatcccc
cacctggtcttcctggatgattttgagcaagtgaagtctatcggcaggtatcttgagaag
gactggagagggttattggctgactgtttccccaagatcatggtcaacatcctgccatac
tttgccttgtctggccaggatgcacaggttgcacagcagagagagaaggcccacagagtg
tacgacctgctcaaagacgccaactgtctgggcaaacagcaaattgacaacctgatccac
agtaacctggcagacatagtggtggaactgctgatgactctgtatgaagaaagtggagct
gaaggggacagagaagacctgaaacgctttataggggaactggaccccgcaccaaaccca
ccatacttcagctcttatgtcattaaagctacactggactaccttagcaagtgccacagt
gcaaaccacaagtctttggtagccattctgtcaaaaactccgatttctatccagaggatt
ctgctggcggtgtgtgaaagagcggcagagacgaccaacagctatgaacgtcatcgcatc
cttctcatgtatcacctgtttgtcaacctgctgctcagagaggtgaaggacagtctggga
ggagcctgggcctttgtcctcagagacatcatctacacactcattcaccatatcaacagc
agatcagttcagtgtgatgaggtctctaaccgaagcctctctctgtgctgcgacctgttg
acctctgtgtgtcaggtggctctgcggttctgtgatgatgctctagactgccaccttcag
gccattgttgggactctcacggctcaggtggccagccggcccgccatctcacagcaggtg
ctcagtctgttgcagtttctcgtgatagaaaatcaacagaagttaaaaggagccatcagc
aggttggagccttttcctgaccttcctgaattcagagagctgcggtctgtacggcacatt
ctcaaatatatcactgggacctttacgctgagacaggagataacccatttcctgtcagtg
acgtcctgtgactccttacctctgaccagacttgaggggttgaaggagctgaccagacag
ctgcacgtgaacaagggacagtttagagagctgctcaaagagtgccacgctgaccccact
gacagtgtgctggtgaagctggttctcagcctgctgcagctctgtaagctagcagccaac
caccccggaggagccgacatcctagaggcagcaggcagctgtctgggagaactgggtcct
gtggatttctccaccatcgccctgcttcatggcagagaccccttatatgaaaaggcagtg
tctctctttgcctccactgagtcacagtgtctttacatcatcctcaactgcatgaacgac
gcactcactcaacagcgcattgaggtgaggaaggcagccgctgagtgtgtgacgagcatc
ctcgccactcagtctggagtggacttctgggagcaacacaaagacaacagagaccccatg
ctggcctacctcaatccctttagaaaggccaagaagaatgtggcagctgtggctgctgag
gagagttcagaggccagggagaagctggagagtcaggagttttggattccccaggcaggc
agccacaaggcctggctgaaggctctgtgcaccgccctgctcgacagtggaggagtcagg
agtgaggctctgctactgtcacgacctctgtgtctggtgtgggtggactgctgtcagagg
ctgctgccccttatcattcactccatccttctggatgactctaatggttcgtggagggat
ttgctctcctcccacattcagaacttcttcagcttttgttccagaagcgctcaggcctcc
agtcggtctgccacacctctcaactctgattctgagtcagacactgccagccagggcttg
cacgacaagacctctctgcgcaccatgcttgctgttattgactatctgagacaccagcag
agaccactggaagctgatagcaactcctgtggtacggtatgtgactcaaatttctggctg
gagctgaactacctggaggtggccaaagctgctcagtcctgctcagcacatttcaccgcc
ctgctgtacactgagatctatgtcgataagattaaatctaacatggaggaaagtcgcaga
accaagtcccgagcaacacgtaggatcaattttgaagagaacagccaaaacttcaccatc
tccagcctgactgagaaaagtatggaagacaccaaaatcagtctgcaggagctgctgatt
gaggtgtatcggagcatcggagagcctgatagtttgtatggctgtggcggggagacgatg
accagtccactgacaaggattcgaacatatgagcatgaagctatgtgggggaaggccctc
acctcatacgacctttactccactctgcctgaggtcactcgacaagtgggaattgttgag
ggcctgcagaactttggtctgagcagcatccttgccacatacatgaggggtctagagagt
gaaggggtggagtggggagctgagctgagagagctccgcttccaggccgcctggaggaac
acgcagtgggactgcgagctgccagagaggagtgagaaatccatacctggctaccatgaa
tcagtgttttgtgccatgcaagcactgagggacaaagagttctccatatttgatgaaact
atgaaacaggccaggggtgcagaggtggaagagctgtgcagaggcagtctagaggctgtg
tcttctctgtacccagctctcaggaacctgcagagcatcagggagctggagagtgttaaa
cagctcttttccaggcccttttcagatgtgactctgagggaagtttgcagccattggcgg
cagcactcccagctgctcgctgacagtgactttgctttggtggagcccattctggccatc
cgctctgtgtcgcagcacaccctgatgtcgagggtgggagaccccgacagcatccagtac
ctcagctccatgctcaccgaccacctcatggagctctgccggctggcttgcaaggctggg
aatacacagctggcagagcgggcagtcttccagatgaagcagcaaggtggtggagggtcc
tgggcgccatcccctgtgtcgtcatggcaactggaggaagcccaagtgttctgggcaaaa
ggagagcagggactggccctgggcctgctgagacagatgataaacaacctagaggaaaag
gtggacttaaatcctgctctggccccggtctacaccgagtgcctcaggctgtgtggtaac
tggctggctgagacctgccttgaaagccctggagttatactggagaagtacctggagagg
gcagtggaggtgatcaagggggaatcaggagttcaggactccaggctgcagagtcagcgg
acggaggcattcctttctctggcccgcttctctgacgctcagtaccagagcatcgacaaa
tacatgaactcctctgagtttgagaacaagcaggcgctgctggagaaggccaaaaaagaa
gtggacttgattaaggagcataatgtgtccaacaggtacacaataaaggtgaagaaagag
ctgcagctggatgagacggctctgtccaacctgcaggaagacagacagcgtttcctgtgt
aaggcggtggagaattacatccagtgtcttgagcaaggtgaggagcacgacacctgggtg
ttccgcctggcttcgctctggctggagaatgccaacgttaaggccgtaaatgacatgatg
aagaaaggggtgaagcagatcccttcctacaagtttctgcctctcatgtatcagctggcc
gctcgcatggggaccaagatggcaaatggcatcgctgaggatacgggcttccatgatgtc
ctcatcgacctgatctaccaagcgtctctgcaacaccctcaccacacactcttcatcatc
ctcgccctggtgaacgccaacaaagatgagaacttttgcagcagccggctgtctaagagc
gctccgcggctgacctcgcagtttgacctggagcgttcagatgtggctcggaagatcatt
agtgcgatcaggaaaaagagaggcgagatgatccgagggatcgagcgtctgtgtgatgcc
tacatcactctggcctatatggacgtcagcaagcacaagactgagaagaaggctattccc
atccctgctgatcagcccatcatgcaaatcaaagatctggatgaggttgtcatccccaca
atggagatcaaggtggatccatccggttgctatgacaacctggtgactgtcagatccttc
atgccccaatatcacctggccggaggagtcaacctgcccaagatcatcgactgtgtcggc
tctgacggcaagagcaggagacagctggtcaagggtcgggacgacttgcggcaggatgca
gtgatgcagcaggtcttcagcatgtgctccatgctgctgcagcgcaacacggacactcgc
aagagaaagctcaacatcagacgatacaaggtggtgccgttctcgcagcgtagcggtgtg
ttagagtggtgttctggcacggtgcctattggggagtttctggtggatcccaataaagga
gcccacaaacgcttcagaccccgggactggaccaacctaacatgccgcaagaagatgatg
gaggctcagaggctgccttttgatgagaagctccaggcctacagcgaggtgtgcaagagc
ttcaggccggtcttcaggtatttctgcatggagcgattcctggaccccgcggtgtggatg
gagaaacggctggcttacactcgcagcgtggccacctcctctatagttggctacatcgtg
ggcctgggtgaccgacacatccagaatattctgatcgatgagcagactgctgaactggtg
cacatcgatttaggtgtggcctttgagcaggggaagatcctccccacccccgagactgtc
cccttcagactgtccagagacattgtggacgggatgggcatcactggagtggagggagtt
ttcaggagatgttgtgagaagactatggaggtgatgaggagctctcaagaagctctgctg
actattgtagaggtgctgctgtatgaccctttgttcgactggaccatgaacccgttgaag
gccttctacctgcagcatgacgaacagcaagagctcaacgcaacgctcaactccactata
gggggagatgacatagacaaccaccgtaaatccagtgacagtcagagcttcaacaaagtg
gcggagcgggtgctgctgaggctgcaggagaagctgaagggggtggaggagggtacggtg
ctcagcgtgggggggcaggtcaaccttctcatccaacaagccatggaccccaaaaacctc
agcagcctcttcccaggctggcaggcctgggtgtag
DBGET
integrated database retrieval system
