Siniperca chuatsi (mandarin fish): 122883444
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Entry
122883444 CDS
T08948
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00531
Glycosaminoglycan degradation
schu01100
Metabolic pathways
schu04142
Lysosome
Module
schu_M00076
Dermatan sulfate degradation
schu_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122883444 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122883444 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
schu02042
]
122883444 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122883444 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
122883444 (si:dkey-72l14.3)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
122883444 (si:dkey-72l14.3)
Bacterial toxins [BR:
schu02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
122883444 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
schu00536
]
Heparan sulfate / Heparin
Enzymes
122883444 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
Enzymes
122883444 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
122883444
NCBI-ProteinID:
XP_044068091
LinkDB
All DBs
Position
LG10:complement(10435286..10453826)
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AA seq
559 aa
AA seq
DB search
MARTEPQSRPGPKPEPKLTPYNLRTYTTFSSAILQVRPPVLMPLLLLLAAFADLGIAGPS
QPARPPLLSGQPFIIFWGIPDSSCSSRPDPRSFGMEREGRVAVFYEDTLGSYPYFIDKDT
PINGGLPQHTRLDNHLQKTQQDLEAALPAPRYLGLGVLRWAEWVPQWSRNREKQIMYLEA
SRKLLKAFFPNWTPEEVEKWSQVDFEAAAQSVMMETLREVKRLRPKALWGISPYPSCFNG
NPAQTMLANYTDQCPAAEMALNDELLWLWKRCSALYPLLTLEKLQGGTSGARLYLPSQIR
EALRVSSLTGTAFDLPVFPLIKSVYASTNTFLSQADLVSTIGESAAMGTAGVVIWERSET
KTERECQDLAEFVRKVLGPYSINVTTATRLCSASLCQGKGRCVRQNPESATYLHLPPPSK
MVEKVKEKAEAAKVTDWPDTDTKPAVPDTAEIWKKDFQCQWYKTADRDVSDQQSPKDGAS
VGGTLGENTGDVMGTTTASTITSTSKGASVTELRGSSSPDTGSLTPSLEGTTDSGANPLS
YPNLTVLLLLVAGSLCLEP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaccgagccacagtcgcgtccaggcccaaagccagaaccaaaactgacacct
tacaatctcagaacttacacaactttttcatcagccatccttcaagtccggcctccagtt
ttaatgcccctccttctcctgcttgctgcctttgctgacctcggtattgctggtccatcc
cagccagctcgcccccctctcctgtctggacagccttttatcatcttctggggcatccct
gactcttcctgctccagtcggccagatcccagatcattcgggatggaacgggagggccgc
gtggccgtcttttatgaggacacactgggaagctacccgtatttcatagacaaagacaca
ccgatcaatggggggctaccacagcacacacggctggacaaccacctccaaaagacacag
caggacttggaggcagctttgcctgccccgaggtaccttgggcttggggtgctgcgctgg
gcagagtgggtcccccagtggtcaaggaaccgagagaagcagataatgtatctggaggca
tcgaggaaactgcttaaggctttctttcctaactggaccccagaggaggtggagaagtgg
tcacaggtggactttgaggcagcagcccagtcagtaatgatggagacgctacgggaggtc
aaaaggttaaggcccaaggcattatggggcatctctccttaccccagctgcttcaacggc
aatcccgcccaaaccatgttagccaattacaccgaccagtgccctgctgcagagatggcc
cttaacgacgagcttctgtggctatggaaacgatgctccgccctctaccctctcctcaca
ctggagaagctgcagggtgggacctctggagccaggctttatttgcccagtcaaatcaga
gaagcactacgagtatcatctctgactgggacagcatttgatcttcctgtattcccactg
atcaagagtgtctatgcctcaactaatactttcctgtcacaggcagacctggtgagcacc
ataggagagagtgctgccatgggaacagctggagttgtcatctgggagagaagtgagact
aagacagagagagagtgtcaggacctggcagagtttgtccgtaaagtcctgggaccctac
tctatcaacgtaaccacggcaactcgactctgctcagcctctctgtgccagggaaagggc
agatgtgtccgtcaaaatccagaaagtgccacctacctccacctcccaccgccgtccaaa
atggtggagaaggtgaaggaaaaggcagaggcagcaaaagtcactgattggccagacaca
gacactaaaccagctgtaccagacacagctgagatctggaagaaggacttccagtgccag
tggtacaagaccgcagacagggacgtctcagaccagcagtcccccaaagacggagcatct
gttgggggtacattaggagaaaacactggagatgtaatggggactacaacagcttctacc
ataacttctacatcaaaaggtgcctctgtgactgagttaagaggaagtagttcccctgat
actggaagtctaaccccttcactggaaggaactacagacagtggtgcgaatccactcagt
tacccaaacctgactgttctgctgttgctggtggctggaagtctatgcctggaaccttaa
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