Siniperca chuatsi (mandarin fish): 122886372
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Entry
122886372 CDS
T08948
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122886372 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122886372 (tpra)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122886372 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
122886372
NCBI-ProteinID:
XP_044074383
LinkDB
All DBs
Position
LG13:complement(27568771..27622054)
Genome browser
AA seq
2551 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQHANEALKTQHERFKADSEQQYFDIDKR
LAESQEQILSATKDLQTLKEQNKKLNDELSTLKGIEGETSEDKPPQQQTKAKYEIEAEKR
ELTRLLERRTQEVENLTEDVKRLNEKLTETCKVKMELQLKLDDIQSSETSVQHREKRMEQ
EKELLEKKMEWLTAELKTKTDELWNINREKGKEILELQGSLKNSKEQVTRLERQLTSLKE
TSESQSKRAGDLNNKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKGAATDMETKNQELSR
AVEELSKLVKDIGEANKALEKKVSEGEELKTHLEAELREKIKKMEKELENATMKAAGKHC
CVPSLTEEQLDSMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARAEIYSLQKEKEEAKQCCDTMERA
KLRTERQLEDTSTQVCALLVELEEARGNQVTKDEGSSANISSTSEVISPRHLSFRSVEEL
QRQNQSLLGRLRELEEEKDRQQSQVTSARVSELEASVDKLQKEAEQLREQRNQQKQLADS
SARQRDMYKALLTQSTGFSLPLQGSDSSSHPEHVKPSVPATRSTPQRAAATESAQTAQAK
AALKQLNDAFTLYKKEKAENDRMSNETNDTLQRQLTELRFSHAKMTSQLEFSNKRYEILQ
ETVSAYRREISALQDRNQKMAATAQRHEQIIHTMSQDLRQANEKLAMEEVRVQNLTKERD
MLRNAESRLNREKEAMLAEQRNQNLLLTNLKTIQLTMERTEADTRQRLNNKIEHLEAELA
SMKTRLDQEVAQRHSLGRTMDAQLLEAKKQLETQNILQQKTRELLHSSEQQVTTLKAQLA
SASSSEAVTTSSSTTTPATRASALRAPLRVRSPVPAASQQPGPSEQELAEVKGLLRTAEE
QNSELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLESRLKESEEVQKQLEKRILE
VEKMKQQVQEERRKAVDAVEKQVCELQRSLKASQAEQQEALERAAAAVTLEQKAIQDSLL
QTKLAGEAQAKYERELMLHAADVEALQELKKRTQQEAARKMELEEQLNKTTSLLQEKTAG
WTTVERQLKDDLSNKSRCCAELGKQNALLHQQMDEMATKSQQLQQQEQQLDLSFSGEGKT
TEQILEILRFVRREKEIAVARYEASEGEALRHKQRVEHQDREVKELQEALNAEREKMQDT
LRTLAQQEEQLKNMETISALQETNRMMKLDRDKLEQELQQAQAKVTKLQSDISPLHHTLS
QLSEKNGSLQADKRILEEDLKRWRAKAQQLVSQQKDGDVEERQKIATEREAQQRRITQLA
EETAKLKTELARSNASSNSAQSQLQALRDSVARLTSERDTMKKDLETKNSDILEKNKTIT
QVKKIGRRYKTQYEELKVQHDKLVEETAAKAGSEVGPSQEVQKELTKAQEELNKAREELI
TLKEEVQQKQEVAQKYQQELEKAQKENQQTKEKFQEVQNQLTQNQNQLTQVQSQLSQTQT
QLQQNQNQLTQSQKELQQAKTHTQQVQNQLKSAQSQAQARQNQIHQIQRELQQAKESLQQ
NLANQKELQQTHQNSQQSHNQEVSNLKTALSQAESKVTELQSHLDSLQKMVGEREADIKR
QQEQLTEANQANEASRANQNQSSQSIQASDANVASDANQALQEELAKLRQEQSESKNREE
QLRQQMAEKEEKTKKVFMGAKSKINQLNSAKEQLSQEIEELKQSKEELEVRMNALKSQYE
GRVLRLERELRELRETQAHSDPREEPQDQSGAKVGDQARSADQRQISLKSPAQDRGSSSL
SDPPTANIRPTPSTPSPSNKPSPSPGSKATPRASIRPMVTPATVPIPTPTATVMPTTQTD
SQEVLMSTGASVHSTSSSLVNTPPSITQPTSTQATAFVQPTQQQAANQDAGPSMDAERPS
TSSSVIGTAGSKRGREDEEEESRPESSHTPPTTKKLRLKPTMPLQMEDDEEIEGELRDEG
ERQDSPDDSRELPEEGFSVLAEDDENIEEEGVSQSVPSDQMSSQGSTVIRDVIVIDTDSE
SRESKEGEEKREDKGEEEDEEEEEEEEEEEEEEEEEEEEYKEEEEDDEDEDDAGDSGMRE
VEERNENREAEEEGGEGESSEAPNAEENVCGASTDSQGPSEPSHSSEGSSSATSESDPPR
DPIHLPPTSSSSAPSPSSSSLTPRLPHPRRPPHPLPPRLYIQPPAPELGPPHTQRQPSQL
RRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRF
RFGPPEDLLPQTSSSHSDLGQLASQGAVCVGLGMYESPLFLAAHDEDGGGRSVPTTPLQV
AAPVTVFTESLPSDSGDNMASQSVPMVTTSTGMASAGDDGDEVFMEQEGEGMEPHRTVVF
SSPGIESSLESQTDMESTGQQSDDASLPSTSQDPDTSSVTQRRTVASQPLISSLSGRGTR
GGRVEARTLLSRRGTFSRGGRGGAMGRGGIA
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggaacggacggagttgaacaaactcccgaaaggc
gcccagaacaagctcgagaagtttgtaacggagctacagcatgctaacgaggcgctcaag
acgcagcacgagcggttcaaagcagacagtgaacagcagtattttgacattgacaagaga
ctggcggagagtcaggaacagatcctctctgccaccaaagacctgcagacacttaaggag
caaaataaaaaactcaatgacgagctgagcactctgaagggaatagagggagagacctct
gaagataaaccaccacaacagcaaaccaaggccaagtatgagattgaggcagaaaagaga
gagctgacgaggctgctggagaggagaacgcaggaggtggaaaaccttactgaggatgtg
aagcgtctgaatgagaagctgacagagacctgcaaagtcaagatggaactgcagttaaaa
ctggatgatatacaatcatctgagacttctgtacagcaccgggagaagcgtatggagcag
gagaaagagttactcgagaagaaaatggagtggttaactgcagaactgaagaccaaaact
gatgaactgtggaacatcaacagagagaaaggcaaagagatactggagctacagggtagt
ctgaagaacagcaaggagcaggtgaccagactggagcgtcagctcacttctctgaaggaa
accagtgaaagccaaagtaaaagagctggagacctcaacaacaaattgaaacaggctaaa
gacgaacagagtgccatggaagagaaataccgcaatgaactcaacgctcatgtcaagttg
tcttcactctacaagggggctgcaacagacatggagaccaagaaccaagaactgagcaga
gcagtggaagagctcagcaagctggttaaagacattggggaagctaataaggctctagaa
aagaaggtgtcggagggagaagaactaaagacgcaccttgaggcagagcttagagagaag
atcaagaaaatggagaaagagctggaaaacgcaacaatgaaggctgctggcaaacactgc
tgtgtgccctctctgactgaggagcaattggactccatgtgtccatcggcagctgccatc
gctgcaattgtcaagcctggcatgaagttctttgatctgtataatgcgtatgcagagtgt
cagacgcagcttcagcttgagaagcaggagaccaggagagtgagcagagttctggatgag
attgtccaggaggttgagtccaaggctcctgtcctcaagcgtcagagagaagagtacgag
agcatgcagagatccatggcttccttgtgcaacaagctggaacaagctcgagcggagatc
tacagtttgcagaaagagaaagaggaggccaagcagtgctgtgataccatggagagagcc
aaactaaggacagagagacagttggaggatacatctacacaggtgtgtgctcttctggtg
gagctggaggaagccagaggtaatcaggtgaccaaggacgaaggcagctccgccaacatt
tccagcacctctgaggtcatcagtccacgccatttgtccttccgcagtgtggaggagctg
cagaggcagaaccaaagcctgctaggaaggctgagggagctggaggaggagaaggacaga
cagcagagtcaagtaacatcagcacgtgtgtcagagttggaggccagtgtggataagctt
cagaaggaggcagagcagctgagagagcagcggaaccagcagaaacagctggctgactcc
agcgccagacagagagacatgtacaaggcccttctgacacagagcaccggcttcagcctg
cctcttcaaggttcagattcttcatcccaccctgaacatgtaaagccctcagtcccagct
actcgctctactcctcagagagctgctgctaccgagtcagcacagactgctcaggctaaa
gctgctttaaaacagctgaatgatgcctttactctgtacaagaaggagaaggcagagaac
gacaggatgtcgaatgaaacaaacgacacgctgcagaggcagctgacagaactccgcttc
agccacgccaagatgacctctcaactagagttcagcaacaagaggtatgagatactccag
gagactgtatcagcctaccgcagagagatctctgccctacaggacaggaaccaaaaaatg
gctgcaacagcccaacgacacgaacagatcatccacacaatgagccaggacctgcgacag
gctaacgaaaaactggcaatggaagaggtgcgggtacagaacctgactaaagagagagac
atgttaagaaatgcagagagtcgactcaatcgagagaaggaagccatgctggctgagcaa
cgtaaccagaatctgctgctcaccaacctaaagactatacagctgacgatggagcgtaca
gaggcagacactcgccagcgactgaacaacaagatagagcatctggaggcagaactggct
tcaatgaagaccaggctggaccaggaagtagcacagaggcactccctcgggcgcaccatg
gacgctcagttattagaagctaagaaacagttggagacccagaacatcttgcagcagaag
accagggagttgttgcatagctctgaacagcaggtgacaacactgaaagcccagctggct
tctgcttcatcctctgaggctgttaccacctcaagcagcacgaccaccccagctaccaga
gcttcagccctcagagcaccacttagagtacgctctccagtgccagcagcctcacagcag
cccggcccatcagagcaggagcttgcagaggtgaaaggtctcctgcgtactgctgaggaa
cagaacagcgaactagcagagcagctaaagaatgctaatgctactgtggagcagtacagg
gctgtggtactgaccctggaagacagtctaaagaaagaaaaggagtctcgctcccctctg
gagagccggctgaaggagtcggaggaggtgcagaagcagctggagaagaggattttagag
gtggagaaaatgaagcagcaggtgcaagaagagaggagaaaggctgtggatgcagttgaa
aaacaagtgtgtgagctgcaacgcagtctgaaggccagccaggcagagcaacaggaggcg
ctggagagagctgctgctgctgttacactagagcagaaggccatacaggacagcctgctg
cagactaagctagctggagaggcgcaggctaagtatgagcgggagctaatgcttcatgct
gctgatgtggaggctctgcaggagctgaagaaacgaacccagcaagaagcagcacggaag
atggagttagaggagcaactgaacaagaccacctccctcctgcaggagaaaactgcaggc
tggaccacagtggagagacagctgaaggatgatctgtccaataagagtcgttgttgtgcg
gagctggggaagcagaatgcactccttcaccaacagatggatgaaatggccaccaagagt
cagcagctgcaacagcaggagcagcagcttgacctgtcattcagtggggaagggaagacc
actgaacagatactagaaatactcaggtttgtgcggcgtgagaaagagattgctgtggct
agatacgaggcgtctgagggagaagcccttcgccacaaacagcgagtggaacaccaagac
agagaagtgaaggagctacaagaagctctgaatgctgagagggagaaaatgcaggataca
ttgaggactctggcccagcaggaagaacagctgaagaacatggagactatcagtgctctc
caagaaaccaacaggatgatgaaactggacagagataaactggaacaagagctgcagcaa
gctcaggctaaagttacaaagctccagtcagacatcagcccactacatcacactttgtct
cagctgtcagagaaaaatggctccctgcaggctgataagaggatactggaggaagacctc
aaacgctggagagccaaagcacagcagctggttagccaacagaaagacggcgatgttgag
gagagacagaaaatcgccactgagagagaagctcagcagagacgcatcacacagctagct
gaagagacagccaagctaaagactgaactggcaagatccaatgccagtagtaactcagct
cagtctcagctgcaagccctcagagactctgtggcccgtctgacgtcggagagagacact
atgaagaaagacctggaaacaaaaaacagcgacattctggagaagaataagaccatcacc
caggtcaagaagattggacgacgctacaagactcaatatgaggagctcaaagtccagcat
gacaagctggttgaggaaacagctgctaaagcaggaagtgaggtgggtccaagtcaggaa
gttcaaaaggagctgactaaagcccaggaggagctcaacaaggccagagaggagctaatc
acactgaaagaggaggtgcagcaaaaacaggaggtggcccagaagtaccagcaggagctg
gaaaaggcccagaaggaaaaccagcagaccaaggaaaagttccaggaggtccaaaaccag
ctgacacagaaccagaaccagttgacccaggtccagtctcagttgtctcagacccagact
caactacagcagaatcagaaccaactgactcagagtcagaaagaacttcagcaagccaag
acccacacccagcaggtgcagaaccagttaaaatcagctcagtctcaagctcaggcccgt
cagaaccagattcatcagatccagagggagctccagcaggctaaagaatcccttcagcag
aaccttgctaatcagaaagagctacagcagacccaccaaaacagtcaacagagccacaac
caggaagtcagcaaccttaagactgctctcagccaagcagagagcaaggtgactgagctt
caaagccacctggacagcctgcagaagatggttggtgagcgtgaagcagacattaagcgt
caacaggagcagctaactgaagctaaccaggctaatgaagctagccgagccaaccagaac
cagagttcccagtccatccaggccagtgatgctaacgttgctagtgatgctaaccaggca
ctacaagaggagctggcaaaactcagacaagagcagtctgagagcaagaacagagaggag
cagctcagacagcagatggctgaaaaagaggaaaagacaaagaaggtcttcatgggagcc
aagagcaaaatcaaccaattaaacagtgccaaggagcagctcagtcaggagatagaagaa
ctgaaacagagtaaggaagaactggaggtgagaatgaacgccctcaagtctcagtatgaa
ggacgagttcttcggttggagagagagctgagagaactgagagagacacaagcacactct
gacccaagagaggaaccacaggaccagagtggagctaaggtgggtgatcaggccagatct
gcagaccagagacagatatctttgaagagtcctgcccaagataggggaagctccagcctg
tctgaccctcccactgccaacattcgccccaccccaagtactccatctcctagcaacaag
ccaagcccctcccctggtagcaaggccacaccccgtgccagcatccggcctatggttacc
ccggcaactgtccccatcccaacacccaccgccactgtcatgccgaccactcagactgac
agccaagaggtgctgatgagtacaggagcctctgtgcactctaccagctccagtctggtg
aacacacccccatcaataactcagccaaccagcacccaggccacagcctttgtccagccc
acccagcagcaggcagccaatcaagatgcaggccccagtatggatgcagagcgaccatct
acttcctcctctgtgattggaacagcaggttcaaagcgaggcagagaggacgaagaagag
gagagcagaccagagagttcacacacccctccgaccactaaaaaactacgactaaaacca
acaatgccactgcagatggaagatgatgaggagattgaaggagagctgagggatgaggga
gaacgacaggattcaccagatgacagtcgggagcttccagaggagggtttctctgtctta
gctgaagacgacgagaacatcgaggaagaaggcgtgtcccagtctgtcccctctgatcag
atgtcctctcagggctccactgttattcgggatgtcatcgtaatcgacacggacagcgag
agccgtgagagcaaagagggggaggagaagcgtgaggacaaaggtgaagaggaagatgag
gaggaggaagaggaggaggaggaggaagaagaagaagaagaagaagaagaagaggagtat
aaggaggaagaggaagatgatgaagatgaggatgatgctggtgacagcgggatgagggaa
gtagaggagagaaatgagaacagggaggcagaagaggagggaggtgagggggagtcatca
gaagcccccaacgctgaggagaatgtgtgtggagcctctacagactcccagggtccctct
gagccatcacacagcagtgaaggcagcagtagtgccacatcagagtccgacccccccaga
gaccccatacacctccccccaacctcctcctcctctgcaccctccccctcctcttcttct
ctcacaccccgcctgccccacccacgtaggcccccacaccctctcccaccacggctctac
atccaacctccggctccagagctgggacccccacacacacagagacagccctctcagctg
cgcagaccatcagtaggacgcggacctcaactaacccctggaataggcagcatgcaacat
ttctttgatgatgacgacagaatggtacccagtactcccactctggtagtcccacaccgc
actgatggctttgctgaggctatacattctcctcaagtagcaggtctgtccaccaggttc
aggtttggacctccagaggacctgctgcctcagacatcatcctcgcactcggacctggga
cagctggcctctcaaggagctgtgtgtgtaggtctggggatgtatgagtctcctctgttc
ctggccgctcatgatgaagatgggggaggaaggagtgtccccaccacacctttacaagta
gctgcaccagtgacggtcttcacagagtctctgccctcagacagtggtgacaacatggca
tcccagtccgttcccatggtaaccacctccactgggatggcttctgctggagatgatgga
gatgaagtcttcatggagcaggaaggagaggggatggaacctcatcgaaccgttgtgttt
tccagtcctggtatcgaatcgtctttggagagccaaacagacatggagtcaacgggacag
cagagtgatgatgcatcactgccatctaccagccaagaccctgacaccagcagtgttact
cagcggcgcacagtagcaagtcaacctctgatcagcagcctgtcaggcagaggaaccaga
ggagggagagtggaggccaggacattactcagccgcagaggaactttctctcgaggggga
aggggaggagccatgggcagagggggcatcgcctaa
DBGET
integrated database retrieval system
