Siniperca chuatsi (mandarin fish): 122888245
Help
Entry
122888245 CDS
T08948
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00780
Biotin metabolism
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
122888245 (hlcs)
Enzymes [BR:
schu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
122888245 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
122888245 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
122888245 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
122888245 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
122888245
NCBI-ProteinID:
XP_044078363
LinkDB
All DBs
Position
LG14:744742..818003
Genome browser
AA seq
926 aa
AA seq
DB search
MLITLCYVYLWVRFHKCYSVLIRNSLSRLNSSSFSFSVCSSSASSAVAPPTGRHTAARRQ
PSPLPSEDIVFLQLGDKAVYVTEPQVCDDLSKWTVLLGSSLVCGPQIENISFIIEATGHR
VGYHSPHTSNKKVLKWSDYCLPLACSPGKPFKAVAQASVDNFSRLGVAFIEDRLQLDNGL
MPSKIVPVLLQESTLSELLEKQCPQTEMSLQLCGTQTEKSVAEPFPSNLSADPQHLGCRK
GSLLLTLEAKRRLEERRGSEPLRSTQDLGPVGDSEDNSLGNHHHMESHGHHLHLSSCHEC
LELENSTILSVKYASAENIPDLPDDNSVELDSGDETMDEVEHDTKGFYGQSNGFDCNSKP
PNVLVYTGGCQERFQAVFQLLSECINMENNIIYPLQPQQALSDPWLDNSRLLVLAEEETL
TPQLQTRFLTYLSQGGRVLGLASTLCPAGLCLEVRERRRGQVSTLSFTRENSTELELSLL
ASGKVYIRDTQGGGEVELWGELKGNIPHQRDMVIVRVTHGGDGGEAVLCQVHLEIGPDSQ
NLTSEGFDELKVSNALRYEVLTEILTSLGLSCELNKTPAPSPVHLLATSLEAKDSFLKWL
QTHADENGLLTLSKASLRMVSCSELQDCPLLPEGSLALVTNSSESQSWAQFSMETYTKNL
KTSLLGRTLLYAEVVTSTMDLLEGLTLHLPKDVGLIAVAARQSQGKGRGRNAWLSPLGCA
MFTLRVQVELNSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYSNLMKL
GGVLVTSTLIGSTFHLLIGCGFNVTNSNPTVCINDLIQQYNIQHNCSLQPLSCAQLIART
VSCLESLISSFQQEGPDAILPTYYKRWLHSKTRVRLWSENGLEAEVVGLDCNGFLQVHSK
EQGVVSVEPDGNSFDMLKNLVVIKQR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgttgtgctacgtctacctgtgggtgcgctttcacaagtgctactcggtg
ctgatccgcaacagtctgtccagactgaacagcagcagcttcagcttcagtgtctgctcc
agctcggcctcatcagccgtagcaccgccgactggacgccacacagctgcacgccggcag
cccagcccgctcccatccgaggacatcgtcttcctccagctgggagacaaagccgtctat
gtcacagagcctcaggtatgtgatgatctcagcaaatggactgtgctgttggggtcctct
ctggtttgtggtccacaaatagagaatatttcattcatcatagaagctacaggacacaga
gtgggctaccattctcctcatacatcaaataagaaagtcctgaagtggtctgattactgt
cttcctctggcctgtagccctggcaaaccgttcaaggcggtggctcaggccagtgttgat
aacttcagtcggctgggggtggcttttattgaagatcgccttcagctggacaatggactt
atgccttcaaagatagtccctgtcctcctccaagaatctactctcagtgagctgttggag
aagcagtgtccacagacggagatgtcactgcagctctgtggcacccagactgaaaagagt
gttgctgagccttttcctagtaacctgtcagctgacccccagcacctagggtgccgtaaa
ggtagccttctccttaccttggaagcaaagaggaggttagaggagcgtcgaggatcagag
ccgctccgcagcacccaggatttgggacctgttggtgactcggaggacaattccttgggg
aatcatcaccacatggagagccatggacaccacctccatctatccagctgccacgaatgt
ttggagctggagaacagcaccatcctctctgtcaaatatgcctccgctgagaacattcca
gaccttcctgatgataattcagtagagctggatagtggggatgagactatggatgaagtt
gagcatgataccaaagggttttatggtcaaagcaatggatttgactgtaatagcaaaccg
ccaaatgttctggtctacacgggtggttgccaggaacgttttcaggctgtttttcagctt
ttatcagagtgtataaacatggaaaacaacataatatatcccctccaaccacagcaggct
ctgagcgatccttggctggacaacagcaggctcctggtactggcagaggaggaaaccctg
accccccagcttcagacgcgctttctcacttacctgagccagggtggcagggtgctcggg
ctagcctccaccctgtgccctgcaggcctctgtctggaagtcagagagaggcgacgcggg
caggtcagcacgctgagcttcaccagggagaacagcacagagctggaactgagcctgttg
gcgagtgggaaggtctacattagggatactcagggaggaggggaagtggagctctggggc
gagctgaaagggaacattcctcatcagagggatatggttatagtcagggtaacccacgga
ggggacggtggggaagctgtcctctgtcaggtccacctggaaattggtcctgactcccag
aatttgacgtcagaaggttttgatgaattgaaggtcagcaacgcactgcgttatgaagtc
ttgacagaaatcctgacttctctgggcctcagctgtgagctaaacaagactccagcccca
agcccagtccacctgctggccacctctctggaggccaaggacagcttcctgaagtggctg
cagacacatgcagatgaaaatggcctcctcacattgtccaaggcctccctcaggatggtg
tcctgttctgagctccaggattgtcctttgctgcctgagggctctcttgccctggttacc
aactcttcagagtcccaaagctgggcacagttcagtatggagacctacaccaagaacctg
aagaccagcctactagggcgcaccctgctgtacgctgaggtcgtcacgtctaccatggac
ctgttagaagggctgactctgcacttaccaaaggacgtgggtttaatagcagtagctgcg
cgacaaagccagggcaaaggtcggggcaggaatgcctggctcagccctctgggttgtgcc
atgttcactctgagggtccaggttgagctgaactccaggctcggacagaggattcccttt
ctgcagcatctggctgctctggcggtggtggaggctgttcgcacacttcctggataccag
gacatagacctgagggtgaagtggcccaatgacatctactacagtaacctaatgaagctt
gggggagtactggtgacttccactctaataggatcaacctttcatctgctcataggctgt
gggttcaatgtgacaaacagcaacccaacagtgtgcatcaatgacttgatccagcagtac
aacatacagcataactgcagcctgcagccactcagctgtgcccaactcatcgctcggact
gtcagctgcctggagtccctcatcagcagtttccaacaagaaggcccagatgccatcctg
cccacctactacaagagatggcttcacagcaagactcgggtgcgtctctggagcgagaac
ggactggaggctgaggtagtgggtctggactgcaacggcttccttcaagtgcacagcaag
gagcagggcgtggtctcagtggagcctgatggaaactctttcgacatgctgaagaacctg
gtggtcatcaagcagcgttag
DBGET
integrated database retrieval system
