Spiroplasma clarkii: SCLARK_0033
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Entry
SCLARK_0033 CDS
T05330
Symbol
rpoE
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
scla
Spiroplasma clarkii
Pathway
scla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCLARK_0033 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scla03021
]
SCLARK_0033 (rpoE)
03400 DNA repair and recombination proteins [BR:
scla03400
]
SCLARK_0033 (rpoE)
Transcription machinery [BR:
scla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCLARK_0033 (rpoE)
DNA repair and recombination proteins [BR:
scla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCLARK_0033 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ARU90866
UniProt:
A0A1Y0KYQ5
LinkDB
All DBs
Position
complement(29117..29524)
Genome browser
AA seq
135 aa
AA seq
DB search
MAQISTIEMAYNFLRTTHGDASFEDIWNAISKDIHGSNHRKNEIIAELYSDLVLDNRFAL
TAEGKWGLRDYLKFDDIKKQYDYIDKFDTTEEFSDLDNTQALDPDSFDEDEDEDDDDDYD
SLDDFEVDIDEDFDD
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatcagtacaattgaaatggcatacaattttttaagaacaactcatggtgat
gccagttttgaagacatttgaaatgctatttcaaaagacatacatggaagtaaccataga
aaaaatgaaatcattgcagaactttacagtgacttagtcttagacaaccgttttgcactt
actgcagaaggtaagtgaggcttaagagattacttaaaatttgatgacattaaaaagcag
tatgattacattgacaaatttgacacaacagaagaatttagtgaccttgataatactcag
gcactagaccccgattcatttgatgaagatgaagacgaggatgacgacgatgactatgat
tcattagatgactttgaagttgacattgatgaagactttgatgactag
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