Styela clava (leathery sea squirt): 120326929
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Entry
120326929 CDS
T07291
Name
(RefSeq) paired box protein Pax-3-A-like isoform X1
KO
K09381
paired box protein 3/7
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120326929
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120326929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_23
PapD_C
OAR
HTH_32
Motif
Other DBs
NCBI-GeneID:
120326929
NCBI-ProteinID:
XP_039249218
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MMHRPGTFRPAFPLEGQGRVNQLGGVFINGRPLPNHIRHKIVEMAAHGIRPCVISRQLRV
SHGCVSKILCRYQETGSIKPGAIGGSKPKVTNAEIESKVEQYKKENPSMFSWEIRDQLIK
EGLCDRSSAPTVSAISRILRAKGCDTSNESLEDGENEAHSDTSSNGQGRDRNGSGEGGES
DCESEPDLPLKRKQRRSRTTFNADQLEELERCFERTHYPDIYTREELAQRTHLTEARVQV
WFSNRRARWRKQMAAQQLPPIHPHHTHPHLPHHLGAYHPTIAAAAAAGAGMSAHNYMLQA
AAAAQHQQHQPTASSSHPLSHHAQSSHYPHHPVHGHPSMSTSNSATGTSTIGALESSFTP
PIAHDLTSMHRHTHHPLSSPLHHAHPYSQTSMRYDGGAHDVALNAAAAAAGYGLVGASAA
AAAAARYQFSSSAFGDAYQHPTLTQENSLFGVNGTNDSTNTRSDLTPIDYGRHSSDSRTG
QRGMSSSSAIGGSNQPTEDLSPSASSPTNCHQSRIGQTNMQHREGRSTSSNGASENMSRT
AVSNVAGSPTSASESRTADITETTYGNSSGMHHHQQTANNHIRHLGSAHGGEHVTNNAPQ
QPLTSNADAQQMLAPFSHRTPIGSDHPTTAGTAAYSAVNGFGATHDQNMAAAAAHQYASH
NPFASCQYSGYGQGNGVEYENPGITALRMKSREHSAALGLISVGGSSTSMQSAY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacaggccaggaacgtttcgaccagcatttcctcttgaaggacaaggtcgtgtc
aatcaactaggaggagttttcatcaacggtcgacctcttccaaatcacattcgacacaaa
attgtggaaatggcggctcatggtataagaccttgcgtcatcagcagacaattaagggtt
tctcatggatgtgtgagcaaaattttatgcagatatcaagagaccggatctattaaaccc
ggggcaattggtggtagcaaacctaaagtgacaaatgcggaaattgagtcaaaagttgag
caatataagaaagaaaatccatcgatgtttagctgggagatcagggatcaattgatcaag
gaaggattgtgtgatcgcagttctgcaccaacagtcagtgcaatcagtagaatcttgaga
gctaaaggatgcgacacttctaatgaatcattggaagatggagagaacgaagcacattcg
gacactagcagcaacggtcaaggcagagatcgcaatggtagcggtgagggcggcgagtca
gattgcgaatcagagcccgatttacctctcaaaagaaaacagaggcgaagcaggaccacg
tttaatgctgaccagcttgaagaattagaaagatgctttgaaaggacacattatcctgat
atttacacaagagaagagttggcgcagagaactcatctcactgaagcgagagtacaggtc
tggtttagtaaccgaagagcgagatggaggaaacaaatggctgctcaacagttaccacca
attcacccacaccatactcaccctcacttacctcaccaccttggagcataccatccaaca
attgccgccgctgctgctgctggagcaggcatgtccgctcataattacatgctacaagcc
gccgcagccgcccaacaccaacaacatcagccaacggcatcatcttcgcatcctctttca
caccacgcccaatcatctcactatcctcaccacccggtacatggacatccctcaatgtcg
acttctaattcggccacaggaacgtcaaccattggagctctcgagtcatcattcacgcca
cccatagcacatgatttgacttcaatgcaccgacacacacatcacccactttcttctcca
ctgcaccacgcccatccgtactctcaaacaagtatgagatatgacggaggagcacatgac
gtggctctaaacgctgctgccgctgcagctggatatggattagttggcgcttctgctgct
gccgcggctgctgcgagatatcagttttcctcatcagcgtttggtgatgcttatcaacac
ccaacattaactcaagaaaattcgttgtttggtgtcaacggaacaaacgatagtaccaac
acaagatctgaccttactcccattgattatggaagacattcctcagactctcgcaccggt
cagagaggcatgtcgtcgtcctctgccataggaggttctaatcaaccaacagaagatctc
tctccatctgcctcatctccaacgaattgccaccagtctcgtattggccaaacaaatatg
caacacagagaaggaaggtcgacatcttcaaatggcgcgagcgagaacatgtcaaggacg
gccgtcagtaatgttgcaggttcaccaacatcggccagcgaaagcagaacagcagatatt
acagaaacaacgtacggaaatagcagtggaatgcatcatcatcagcaaacagcgaacaac
cacattcgccatttgggatcagcgcacggcggtgagcatgtcacaaacaacgctccacag
cagccattgacgagtaacgctgatgctcagcaaatgcttgcgcccttttcacatagaacc
cccatcggatcagatcatccgacaaccgcaggaacggcagcgtactcagcagtaaacggt
tttggagcaactcatgatcaaaatatggcggcggcagctgctcatcaatatgcatctcac
aatccatttgcatcgtgccaatactcaggatatggccaagggaacggtgttgaatatgaa
aaccctggaattactgcacttagaatgaagtcacgagagcacagtgctgcactgggtctt
atttcagttggaggatcaagcacaagtatgcaatcagcctactaa
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