Styela clava (leathery sea squirt): 120328905
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Entry
120328905 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120328905 isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120328905
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120328905
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
120328905
NCBI-ProteinID:
XP_039251406
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MCTKMAHNLITLTWYTYYAQVVHHLSAHTTGAPKFQMITSDQSEASTEKVKCPQSKTGGT
SSSTKAKELEAPEKLEKVQIEKKIKENILNMNPDESQSPYLDIIEHPKARGFRFRYSCEG
TSQGGIPGASSDKNRKTYPAVQIRNHSGYARIVVQLVTNEMKPRLHPHSLVGKQCQNGIC
TVQCGPKDLTATFPNLTIQHVTRKNAAKILEERYLASEMQLSSFNEGLTAHILNAIKDED
KKRIKSRAATEAESIDLSVVRLMFIAYLPDINGAFTLMLTPVISDAIFDSKSPDAATLKI
CRMDKTCGSASGMDVIYLLCDKVQKDDIQVRFFEENEYGNDDNWDAYGDFSPTDVHRQFA
IVFQTPRYKDVGIHKPVQVQVELRRRSDGEVSEPRTFTYMPVKDDIKLDPEQIMKKRKLS
THSEDHIVGSQTYGEASEPCTFTYMPVVQDDIKLDPEQIMKKRKLSTYSEDQRFREEDTA
LIDSAACCGKLKISINKKMEMVNLWLKSSQTNDYAEHAAMSTSRQSGEFIFQSSGNNTGG
GGKQTKRFGPPPRQANPQKGPLDPSWLLKQMHTMKQEPASPPMTSGGMVMNNEISTQESL
YDSQAMVPSTQGHDDVNEVVAPQISESNFIPGTRVPLPRTLTYNTQAQPQFPQQQIKLEM
GMKSKMSTTQEEI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaagatggcgcacaacctgataaccctaacatggtacacatactatgctcag
gttgtgcaccatcttagtgcacatactacgggagcaccaaaatttcagatgattactagt
gatcaatccgaagcaagcacagaaaaagttaaatgtccacagtcaaagactggtggcaca
agttcttccactaaagctaaggagctggaggcacctgaaaaattagaaaaagttcaaatt
gaaaaaaagataaaagaaaatatattaaatatgaatccggatgagagtcaatcgccgtat
cttgacatcattgaacacccaaaagcgagagggttcagatttcgttattcttgtgaggga
acatctcaaggtggcatacccggggctagcagtgataaaaacaggaaaacatatcctgca
gttcagataagaaatcactcaggatatgcaagaatcgttgttcagcttgtcacaaatgaa
atgaaaccacgacttcacccacattcacttgtgggaaaacaatgccagaatggcatctgt
actgttcagtgtggtcccaaggacctgactgccacatttcccaatcttacaatacaacat
gtcacaaggaaaaatgcggcaaaaattctcgaagaaagatacttggcttcagaaatgcag
ctttcgtctttcaatgaaggattgactgcgcacatcctaaatgctattaaggatgaagac
aaaaaacgcataaaatctagagcagctacagaggcggagtccattgatctctcagtcgtg
agactaatgttcattgcttacctgcctgatatcaatggagcttttactttgatgttgaca
ccggtcatttctgatgccatttttgacagcaagtcaccagatgcagcgacattgaaaatt
tgtcgtatggataaaacatgtggttcggcaagcggaatggatgtgatttacttgttatgt
gataaggtccagaaagatgatattcaagttcgcttctttgaggaaaatgaatatggaaat
gatgataactgggatgcttatggtgatttctcgcctactgatgtacacaggcagtttgcg
attgtatttcaaacaccaagatataaggatgtgggcatacacaagcctgttcaggttcag
gttgaacttagacgcagatcagatggcgaagtatcagaaccacgtacatttacctacatg
cctgttaaagatgacatcaaactagatcctgaacagataatgaaaaaacgtaaactcagc
acacattctgaagaccatattgtaggcagtcaaacatatggtgaagcatcagaaccatgt
acattcacctacatgcctgttgttcaagatgacatcaaactagatcctgaacagataatg
aaaaaacgtaaactcagcacatattctgaggaccaacgttttagggaagaagataccgcg
ctcattgattctgctgcatgctgtggaaaactgaagatttcgatcaataaaaaaatggag
atggtcaacttatggctaaaaagcagtcaaacaaatgattacgctgaacatgcagctatg
agcacttctcgccagtctggtgaattcatatttcagagcagtggaaacaacactggtggt
ggtggaaagcaaactaaacgttttggccctcctcctagacaagccaatccacaaaaagga
ccacttgacccttcatggttgttaaaacaaatgcacaccatgaaacaggagcctgctagc
ccgccaatgacaagtggtggaatggtgatgaataacgaaatctccacccaggaatcatta
tatgactcacaagctatggtgccttccacacaaggccatgatgatgtaaatgaagttgtc
gcaccacaaatttcagagtcaaattttatccctggaacacgtgtccctttaccacggaca
ttaacttataatacccaagcacagccccagtttccacaacaacagattaaacttgaaatg
ggcatgaaatcaaaaatgtcaacaacgcaggaagagatctga
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