Styela clava (leathery sea squirt): 120329307
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Entry
120329307 CDS
T07291
Name
(RefSeq) beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00052
Galactose metabolism
sclv00511
Other glycan degradation
sclv00531
Glycosaminoglycan degradation
sclv00600
Sphingolipid metabolism
sclv00604
Glycosphingolipid biosynthesis - ganglio series
sclv01100
Metabolic pathways
sclv04142
Lysosome
Module
sclv_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120329307
09103 Lipid metabolism
00600 Sphingolipid metabolism
120329307
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120329307
00604 Glycosphingolipid biosynthesis - ganglio series
120329307
00511 Other glycan degradation
120329307
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120329307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120329307
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
120329307
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120329307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
120329307
NCBI-ProteinID:
XP_039251823
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNWWLLAVSCSLLTLSVESREFTVDYKNNVFLKDGEPFQYISGCMHYFRVPRYYWRDRLR
KMRACGLDAVQTYIPWNFHVVDGSYRFDGEHDIAAFLGMAQEEGLLAIIRGFPFSDTEWD
MGGLPSFLLKSKYNPRENPIGLRTSDPRFLSAVKDWLGVILPILKQYLYNNGGPIIMIQI
ENEYGSYYAQDTTYLKSLYYDIDTMLNENVVLFTTDGDGASYLEHGHIDGVFQTVDFGPG
ANVTSSFTLLRKFQPDGPLVNSEYYTGWLDHWGENHHRTSSEAICKIFDEMLAAGASVNF
YMFTGGTNFGYWSGSNGGSISQVTTSYDYDSPISENGDTMEKYFKIQEVISRYKPLPHIS
VPPNITTISYGSLKLTNQGSFWDHLTSLCPDGPVIGSSPLSYEDLDVVGGYVLYRTTVPP
LFQRYGGQNVNLTLENSVRDHAKIYVNQNYVGQLERGSQTLNLGACSEGDQIDILVESRG
RLSVGTGINDTKGIDGKAKISIGTIYIAWLTNWEMYPLNLKNMALNLKSSEQTNGVNMEQ
VPAIYTGTLFAQTVADTFIDLSGGSWTSGYVLVNGFNLGKFQPKQGPQITLYLPTKTILT
DEPILHFTLFEMNPSPTCAVASSSCTINLIDHPMIG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtggttattggcagtgtcatgtagcttattaacgctatcggttgaaagcaga
gagtttacagttgattacaagaacaatgtgtttctgaaagatggcgagccatttcaatac
atctctgggtgcatgcactattttcgcgttcctcgatattactggcgtgataggcttcga
aagatgagagcatgtggattggatgcggtgcaaacatatattccgtggaattttcatgta
gtagatggttcttatcgatttgatggcgaacatgacattgcggctttcctcggaatggca
caagaggagggtcttcttgctattataagaggttttcccttttctgatacagagtgggac
atgggaggcttacccagttttctgttaaaatcaaaatataatcctcgagaaaatccaata
ggtctccgaacatctgacccaagatttttgtctgctgtaaaggattggcttggtgtcata
ctcccaatattgaagcaatatttgtataacaatggtggcccgataataatgatacaaata
gaaaacgaatacgggagctattacgcacaagatactacgtatttaaaatcattatactat
gatattgataccatgctgaatgagaatgtcgtcctttttacaacggatggtgacggcgct
agctatttggaacatgggcatattgatggagtatttcaaacagtagattttggaccaggg
gcaaatgtcacttcttcttttaccctactgagaaaatttcagcctgatgggcctcttgtc
aattcagaatactatacgggatggttagatcattggggtgaaaaccatcacaggacatcg
tcggaagcgatttgtaaaatatttgatgaaatgctagcagcaggtgcatctgtaaacttt
tacatgtttaccggaggaactaattttggatactggagtggatcaaatggtggttcaatc
tcacaagttacaaccagctatgactatgattcaccaataagtgaaaacggagacacaatg
gaaaaatacttcaaaattcaagaagttatttcaagatacaaaccactgcctcatatatca
gtaccaccgaatattacaacaattagctatggatcattgaagttaactaaccaaggctct
ttttgggaccatttaacatcactttgcccggatgggcctgttataggatcttcgccattg
tcatatgaagatttagatgtggtaggagggtatgttctatacaggaccactgtaccacca
ttgtttcaaagatacggtggccaaaatgtcaatttaacacttgagaattcagttcgtgac
catgcaaagatatatgtcaaccaaaattatgttggacaactggaaagaggttcacagact
ttaaatttaggagcatgttctgaaggagatcaaattgatatattagttgaaagcagagga
cgattgtctgtcggtactggcatcaatgataccaaagggattgatgggaaagcgaaaatt
tcaattggcacaatatacatagcctggttaacaaattgggaaatgtatccgttgaatttg
aaaaacatggctctaaatttaaaaagcagtgaacaaacaaacggagtgaatatggaacag
gtacctgcaatatacacaggaacattgtttgctcaaacagtcgcagatacttttatagac
ttatcaggaggcagctggacaagtggttatgttttagtaaatggttttaatctaggaaaa
ttccaaccaaaacaaggacctcaaataactttgtatctcccaacaaagactattttaact
gatgaaccaattctgcatttcacactttttgagatgaatccgagtccaacatgtgcagtg
gcatcaagttcctgcacaattaacctgattgatcatccaatgattgggtaa
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