Styela clava (leathery sea squirt): 120329633
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Entry
120329633 CDS
T07291
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120329633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120329633
Enzymes [BR:
sclv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120329633
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120329633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120329633
NCBI-ProteinID:
XP_039252285
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSKISLESKLPSSTTPSLKNLTVKDFSKLGESQTEALQALTRPHVDSFNWFLNTGIKYSA
RLIPPIQALVQNRRFSVQFMDATIEKPRVDEGFRNCRTLAVYPSECRQRGSTYHAKLHAT
FSYSIDGIKQANIPVMLGVIPIMVKSNSCNLSGLTPKQLVAKQEEAEEMGGYFIVNGNEK
VLRMLVMQRRNFPLGVVRHSWKNRGPNYTEFGIMMRSVSPDLNVANMVVHYLRNGTVNIC
IFHRKEMFYIPLIFMLKCLVDKSDVEIYKELTKTKEDDTYFKTCIQNMLRQAKSLNLHLH
KDFTKYVGGKFRIKLSQPPWTTDAEITKYLLQHNVLVHLKNNEDKFHLLCHMAQKVFDLA
MKKCVPDNLDSVQNQEVLLPGHLYQMVLREKMVLWLLTLSRLIEKQSKLNKNQGLPMLTS
SAIQKAMRSVPEVSNAMSYLLATGNVTTKSGLGLQQTTGLAVVADKLNFMRYISHFRCLH
RGSFFAEMQTTEVRKLLPESWGFLCPVHTPDGSPCGLMNHLAYMCEVVTNRTSNAAIVPM
LYNFGMVGPDSCQIKGPNYYPVLLDGLLVGWLSKKLAKPIADILRTKKSNGEDKIPNTLE
ICLIERTEKISQFPALFLLTDVARMVRPVLNLETGNVEMIGSFEQPYMDICIIPEEAHEH
TTHQELVQNSTLSAVASMTPYSDFNQSPRNMYQCQMGKQTMGTPCQALSYRADNKLYRIQ
TPQSPMVRPYMYDHFKMDNFPFGTNAVVAVISYTGFDMEDAMILNKASFDRGFAYGSIYK
GDLIDLVKIVNDISVKVTFGTLPSDKISAELVKTGKLGADGLPAVGQKLVYGDPYYSYVN
AGTKTFHLQVYKGQETAYVDNIKVLSNNVGTGLFKRVYIILRITRNPIIGDKFASRHGQK
GICSQLWPAESVPFTESGLFPDIIFNPHGFPSRMTIGMMIESMAGKAAAMHGEPYDATPF
SFSENDSAIDHFGKTLRKAGFNYYGTERMYSGVSGLELEADIFIGIVYYQRLRHMVSDKF
QVRTTGPVDQMTQQPVQGRKRAGGIRFGEMERDALAAHGCAILNYDRLLLSSDQTWGHLC
EKCGSILSPILERDLNKGRLYGLGRKTWKCLTCGSSDNVVLVDIPSVYRYLVNELAAMNI
KTVIPSR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataagtttggaatccaaacttccatcaagtaccactccatctttgaagaat
ttaactgtgaaagatttttctaaacttggagaaagtcaaacggaggctttacaagcttta
accagacctcatgtcgattctttcaactggtttttaaatactggtatcaaatactcggcc
agacttattcctcccattcaagctcttgtccaaaatcgtcgtttctctgttcaattcatg
gatgcaactatcgagaaaccacgtgttgatgaagggtttcgtaattgtcgaacattagct
gtatatccatcagaatgtcgacagcgtgggtcaacatatcacgctaaacttcacgctacc
ttttcgtattctattgatggaataaaacaagcgaatattcctgtcatgcttggtgttatt
ccaataatggtgaaatcaaattcatgcaatttgagtgggttaactcctaaacaattagtt
gcaaaacaagaagaagcagaagaaatgggtggatattttattgtgaatggaaacgagaaa
gttctccgtatgttagtaatgcaaagacgtaactttcctcttggtgttgtcagacattca
tggaaaaacagaggccctaactatacagaatttggcattatgatgagaagcgtgtctcca
gatttgaatgttgccaatatggttgttcactacttgcgaaatggcactgtaaacatttgt
atttttcatcgcaaagaaatgttctacattccactaatatttatgcttaaatgcctcgtt
gataaatctgatgttgaaatatataaagaactaacaaaaaccaaagaagatgacacatat
ttcaaaacgtgcattcaaaatatgctccgacaagcaaaatcacttaatctacatttgcat
aaagatttcacaaagtacgttggaggaaaatttcgtattaaactaagtcagccgccttgg
acaaccgacgctgaaataacgaagtatttattgcaacacaacgttcttgttcacttgaaa
aacaatgaagataagtttcatttactttgtcacatggctcaaaaagtgttcgatcttgct
atgaaaaaatgcgtcccagataatttggattcggtccaaaaccaagaggtgcttttacct
ggccatttatatcaaatggttttgcgtgagaaaatggttctatggcttcttactctatct
aggcttattgaaaagcaatctaagctgaataaaaatcaaggtctgccaatgctaacgtca
tctgcaatacaaaaagcaatgagatctgtacctgaagtatccaatgctatgtcctacctt
ctcgctactggaaacgtcacaacaaaatcaggtttgggtcttcagcaaaccactggacta
gctgtcgttgcagacaagctcaattttatgcgatacatatcgcattttagatgcttacat
agaggatcgttttttgcggaaatgcaaactactgaagtcagaaaattactccccgaatca
tggggctttttgtgtcctgtacatacccccgatgggtctccttgtggtttaatgaatcat
ttagcgtacatgtgtgaagtggtaacgaatcgtacatcaaatgctgctattgtaccgatg
ctatataattttggtatggtgggtccagattcatgtcaaataaaaggtcctaattattac
ccagttttactagatgggcttttagtggggtggctatcaaaaaaactagcaaagcccata
gccgatatcttgagaacaaagaaatcaaatggggaagataaaataccgaacacccttgaa
atttgcttgattgaaagaactgagaaaatatcacaatttcctgctcttttcctactaaca
gacgtagcacgcatggtccgaccagtgttgaatttagagacaggaaacgtggaaatgatc
ggatcatttgaacagccatacatggatatttgtatcattcctgaagaagcacatgagcat
acaacacatcaagagcttgttcaaaactctacacttagtgctgtggcgagcatgacgccg
tattctgatttcaatcaatcccctaggaacatgtaccaatgtcagatgggtaaacagacc
atgggaacaccatgccaagcattgtcttacagagcagataataaattatacagaattcaa
acaccacaatcgcctatggtacgaccatacatgtacgatcattttaaaatggataatttt
ccttttggaacgaatgcagtggttgctgtcatcagttataccggatttgatatggaagat
gccatgatcctgaataaagctagttttgaccgtggttttgcatatggttctatttataaa
ggtgatcttattgatttggtgaaaatagtaaatgacatttcagttaaagttacattcgga
actttgccatctgataaaatttctgcggaattggtgaagactggaaaattaggagctgac
ggtttaccagcagttggccaaaagcttgtttacggagatccctattacagctacgtgaat
gccggtactaaaacatttcatcttcaagtttacaaaggacaagaaacagcatatgttgat
aacatcaaggttttgagcaataacgtaggaacaggattgttcaaaagggtgtatataatt
ttacgaataactcgcaacccgattattggagataaatttgcaagtcgtcacggccaaaaa
ggtatctgttctcaactttggcccgctgaaagtgttccatttacagaatctggtctattt
cctgatatcatattcaatccccatggatttccatctcgtatgacaatcggaatgatgata
gaatctatggctggaaaagcagcggctatgcatggtgaaccatatgatgccacaccgttt
tcattttcagaaaacgattcagctattgaccatttcggtaaaaccttacgaaaagcaggg
ttcaattattatggcactgaaagaatgtatagtggcgtttccggccttgaactagaagcg
gatatatttattggaattgtttattatcaaagactgagacatatggtatctgacaaattt
caagttcgcacaactggcccagttgatcaaatgacgcagcagcctgtgcaaggccgaaaa
cgtgctggcggaatcaggtttggtgaaatggagagagatgcattggccgcacatggctgt
gctatattaaactatgacaggcttttattatcatcggatcaaacatggggccatttatgt
gagaaatgtggcagcatactatcgcctattttggagcgagatttgaacaaaggccgtctt
tatgggctcggtcgcaaaacatggaaatgtttgacgtgtggttcatcagataatgttgtt
ttagttgatattccatcagtgtatagatacttagtcaacgaactagcagcgatgaacatc
aaaactgtgataccttctcggtaa
DBGET
integrated database retrieval system
