Styela clava (leathery sea squirt): 120333081
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Entry
120333081 CDS
T07291
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120333081
Enzymes [BR:
sclv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120333081
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120333081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
120333081
NCBI-ProteinID:
XP_039256368
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MVICSDNNVLEDIEDVSPDTSRLYANKSKIVPKITNHRLKIEKSNAERIENLNGSIIPGT
QRIYMQTWGCSHNSSDSEYMAGQLAAFGYQISDDCQNSDLWLLNSCTVKNPAEDHFRNMI
KKAQDLTIPVVVAGCVPQAAPRQEYTKGLSLIGVQQIDRVVEVVEETLKGNTVRLFGQKK
ENGRKTGGARLDLPKIRRNPLIEIISVNTGCLNACTYCKTKHARGELGSYSIEEITQRAE
QSFKEGVVEIWLTSEDTGAYGRDIGVSLPQLLWELVKVIPEGCMLRVGMTNPPYILEHLE
KMAKILNHPRVYAFMHVPVQAGSNRTLYEMRREYTQEDFCNVVDFLQSKVPGISIATDII
CGFPTETEEDFEETMKLCEKYKFPSLFMNQFFPRPGTPAAKMPQINRQEIKKRTKRLSEL
FQSYKPYEHKLGTRQTVLVTEISHDRKHFVGHNKYYEQVLISMEEDLMGKMFDVDIYETG
KHFLKGSRVKDSEASCPGLSDALPKGQISGFSQVSEVPEDDVLFMKGNLKAIERYLPMIL
LMLAVFLSLAVKYYNKYIS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtgatttgcagcgacaataatgtacttgaggacatagaagatgtttccccagatacc
agccgcctgtacgctaataaatccaagattgttcctaaaattacaaatcatcgactgaaa
attgaaaaatcaaatgctgaaaggattgaaaatttaaatggaagcatcattcctggcacc
cagagaatttacatgcaaacatggggttgttctcataattcttcagactctgaatacatg
gctggacaacttgcagcattcggatatcaaatatcagatgattgtcagaattctgattta
tggcttctaaatagttgtacagtgaaaaatccagctgaagatcatttcagaaatatgatc
aagaaagctcaggaccttactataccagtagtagtggccggatgtgttcctcaagctgcc
cccagacaagaatacacgaaagggttatcgttgatcggagtacaacaaattgaccgtgtg
gtagaagttgtcgaggaaactctaaaagggaacactgtacgtttgtttggtcaaaagaaa
gaaaatggaagaaaaactgggggtgctcgactggatttaccgaagatacgaaggaaccca
ctgattgaaattataagcgttaatacagggtgcttgaatgcatgtacatattgcaaaaca
aagcatgctcgtggtgaactgggaagttattcaattgaagaaataacacagagagcagag
caatcatttaaagagggtgttgttgaaatatggttaacaagtgaagacactggagcatat
ggaagagatattggtgtttcacttcctcagttattgtgggaattagtcaaagtgataccg
gaaggctgcatgttgagggttggaatgacaaatccaccttatatattagaacaccttgag
aaaatggcaaaaattttgaaccatccaagagtatatgcttttatgcatgtaccagtacaa
gctggatcaaacagaacattatatgaaatgagaagagaatacacacaagaagatttttgt
aatgtcgttgacttcttacaaagtaaggttccgggaatttcaattgcaactgatattatt
tgtggatttccaacagaaacagaagaagactttgaagaaacaatgaaattatgtgaaaaa
tataagtttccaagcttatttatgaaccagttttttccaagacctggaacaccggctgcg
aaaatgccacaaataaataggcaagagatcaagaaaagaacgaagcggctttcagaatta
tttcaatcatataaaccatatgaacataaattaggaacacgacaaactgtccttgtcacc
gaaatctcgcacgacaggaaacatttcgtcggacataataaatattatgaacaggtttta
atatcaatggaagaagatttgatggggaagatgtttgatgttgatatttatgaaacaggg
aaacattttctgaaaggttccagagtgaaagatagcgaggcatcttgtccaggtttgagt
gatgctttaccgaaaggccaaatctctggattcagtcaggtttcagaagtacctgaagac
gatgtactttttatgaaagggaatttaaaagcgattgaaagatatttaccaatgatttta
ttaatgttagctgtgtttttatcccttgctgtcaagtattacaataaatacatatcctga
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