Styela clava (leathery sea squirt): 120340941
Help
Entry
120340941 CDS
T07291
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00052
Galactose metabolism
sclv00510
N-Glycan biosynthesis
sclv00513
Various types of N-glycan biosynthesis
sclv00514
Other types of O-glycan biosynthesis
sclv00515
Mannose type O-glycan biosynthesis
sclv00533
Glycosaminoglycan biosynthesis - keratan sulfate
sclv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sclv01100
Metabolic pathways
Module
sclv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120340941
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120340941
00513 Various types of N-glycan biosynthesis
120340941
00515 Mannose type O-glycan biosynthesis
120340941
00514 Other types of O-glycan biosynthesis
120340941
00533 Glycosaminoglycan biosynthesis - keratan sulfate
120340941
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120340941
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120340941
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120340941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120340941
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
120340941
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
120340941
2.4.1.90 N-acetyllactosamine synthase
120340941
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120340941
Membrane trafficking [BR:
sclv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120340941
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of breast milk
120340941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
120340941
NCBI-ProteinID:
XP_039265280
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MNYTKVGLTIVAILDVVVVLVLYYTTLTTVSVYDYTKDTKVEFDSLYFSNVTEENHSIEP
NNLFETSKFLGDISRNATVSTHSTLPIPKQKYVLDQFIGNTNYSISGYNGSRVYNTSKYN
NDTGKFCMEKPPRLVGKMAIPNNILPPSWEEIRKQNLNIRGGSYMPENCKARYKIAIIIA
LRGREDQLKILLYHLHPILQRQQVDYTIYTITMAGKGVFNRAKLMNVGFAEANRDRRYDC
YIFHDVDLLLEDDNCLYWCSKEPRELAPYMDKFGYKPLSYSLGCRSSNAPRINKYFGGVV
QVSHELFLEVNGFSNIFWGWGGEDDDMYSRLWSKGHDSVNPYGRQCSYSMIKHEHESTNS
VNKARFTLLYHTISRMQNEGMNTLRYKRISTERNQLYMNITVDIGIPSQKMNHFMESNFD
GIPCNKITTPWD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacgaaagtagggctcactatagttgctattctggacgtagttgttgtttta
gtgttgtattatactacgttaacaacggtcagtgtgtatgattatacaaaggatacaaaa
gtggaattcgattcattatatttttcaaatgtaacggaggaaaatcattctattgaacct
aataatttatttgagacctcaaagtttctgggagatattagcagaaatgctacagtttca
acgcattcaacacttccaattccaaaacaaaaatatgtattggaccaatttattggaaac
acgaactattctatcagtggatataacggatcaagagtatacaatacaagtaaatacaac
aatgatacaggaaaattttgcatggaaaagccacctcgtctagttggaaaaatggctatt
ccaaataacattcttcctccatcgtgggaagaaattcgaaagcaaaatttgaatatacgg
ggcggaagttatatgcctgaaaactgtaaagcgagatataaaatagctataataatagcc
ttacgaggcagggaggaccaattgaaaattctcctctatcatttgcatccgattttacaa
agacagcaagtcgattatactatatacactatcactatggccggaaaaggcgttttcaac
agagctaaacttatgaatgtgggattcgcggaagcaaatagagaccgacgatacgattgc
tatatattccatgacgtggatttactattggaagacgataattgtttatattggtgttcg
aaagagccaagagaactcgctccctacatggataaatttgggtataaacccttgtcttac
tcactcggttgccgttcaagtaatgcgccacggataaacaagtactttggcggagtcgtt
caggtttcgcacgaacttttccttgaagtgaatggtttttctaacatattttggggttgg
ggaggtgaggatgatgatatgtattcaagattgtggagtaaaggtcatgacagcgttaat
ccatatggaaggcaatgttcctatagtatgataaagcatgagcacgaatcgaccaatagt
gtcaacaaagctaggttcactcttctataccacactatatcccgaatgcaaaatgaagga
atgaatactttaagatacaaacgtatttcaactgaacgaaatcaactttacatgaacatc
acagttgacataggaataccgtctcaaaagatgaatcattttatggaatcaaattttgat
ggaattccttgcaataaaataacaacaccatgggactga
DBGET
integrated database retrieval system