Styela clava (leathery sea squirt): 120342704
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Entry
120342704 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120342704
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120342704
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120342704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
DUF5946
Motif
Other DBs
NCBI-GeneID:
120342704
NCBI-ProteinID:
XP_039267592
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MEKLNKLTHLQRQLLDAIFNSGVSRQCLFQYLEITEQQKPGSTVGTQTDITPLYTLWDEN
ESDVKENYKTTNEQRGGSLENLARDGEAHQGSCTTKDNSGSTKTLKKCEDTSVNIKQEMI
ITAEDINRTDKKKPSERNKGTTNSSRKRKGSVSAHDLSPKPQDLSKTRSVKTANRSRKQD
KDDNGIKVTIETVHCDNIVPMELNVSHSLNNKLAAHGANSGTTYSGSSARVENLQPTRYI
QHQQGAFVQLDIARNLAMDMTSNYQPSRAITDEVIRFGQMGRNLSKEDNKSIMPSGGISS
SQPSVTQTHYRIQDNNIQIHMPTQDNSNMYAELKTAQQQLSDQQQFSNAMRAPSFDNEYG
TQQRMHLPPPPPVITSSSISGFEAISMQTGSANNYFQDMGVERQAVYGDSVKTEQNNQSN
PGTLDVELGIVRQNEYSASQVQFPTSMVMTSLGDVRQGVNSNLECSNLNQQGIDQTHSHH
LLAQLQEQSLGMNADMYMMQAPSHEVVTQVKRREDVLYGGQNMQEVHLLEDESEHQMQHQ
TKLEQDTLYEQEKMELDNGTLGQNIRGKKRPNDSDDAASFNDSNLNEIEPDQSITDIVQG
TPGNESKKAEAEHLLSLDPWRVAKSVKAYMAQHNIPQREVVDSTGLNQSHLSQHLNKGTP
MKQQKRWLLYAWFIKKKEEINAQFQIASHGLPPDQVEEAAGVSKRARRNRFKWGPASQRI
LYDAYERQRNPTKDERETLVTLCNRAECAQRGVSPSHESGLGSNLVTEVRVYNWFANRRK
EEAFRHKLAQDGSYANAEPVDITNDGRPTDLKVSVGDIYAKGIQRYSLEHHQQSQEPMKS
SRRSSVKSQPMKGNRSSNATGNLNNHPSQSGGGIAFVTQLPQESIEQRLEQNGAIISNTY
SMMTNVTQVKGATMCSLPSVNTLSPIVNAHQIQQSAITGHYSHNGIDASAVSQDPLHQGL
ILNGIFTQGLPPQGTIMTSLPTVRQTNNSSSPSPANIVNEHHQLAAQYQNSTANYVQSAF
PVTCHTKGATRAYQFITASPYSGSVPCTTGGIQIPEGGIQQFILASQTENQVNSMRIPTE
NNRQENLISGGNHSLITQEHPETSPNQQQQRLTYRQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgaacaagctcactcatcttcaacgacaacttcttgacgctattttcaat
agcggagtatcacgtcaatgtttgttccagtatttggaaattacagaacagcagaaacct
ggcagtaccgttggaacacaaactgatattacaccactctatactctttgggatgaaaac
gaatcagatgtaaaggaaaattataagacaacaaacgaacaaagaggaggaagtttagaa
aatttggccagggacggagaggcacatcaagggtcatgtactacaaaggacaattctgga
tcaaccaagacactcaaaaaatgtgaagatacgagcgttaatattaagcaagaaatgatc
attacagcggaggacataaacagaacagacaaaaagaaaccatctgagagaaataaaggg
acaacaaacagttcaagaaaaagaaaaggttccgtttccgctcacgacttgtcacctaaa
ccacaggatttaagcaaaacccgaagcgtgaaaactgcaaataggagtcgcaaacaagac
aaggatgacaatgggataaaagttacaattgaaacagttcattgtgacaatattgtaccc
atggaacttaatgtttcacattcactgaacaataagttagctgcacacggtgcaaattcg
ggcacaacttacagcggttcatcagccagggttgaaaaccttcagccgactcgctatatt
caacatcaacagggagctttcgttcaactcgatatagcacgaaatttagccatggacatg
acttccaactaccaaccatctcgagcaattactgatgaagttatcagatttggacagatg
ggacgtaatttatcaaaggaagataacaaatcaatcatgccaagtggtggaattagttca
tctcaaccgtctgtaacccaaactcactatagaatacaggacaataatatacaaattcac
atgcccacacaagataattcaaacatgtatgctgaactgaaaactgctcaacagcagctt
agtgatcaacagcaattttctaacgcaatgcgtgctccatcgtttgacaatgaatatggg
acccagcaaagaatgcatttgcctcctcctcctccagttataacatcctcttctatcagt
ggctttgaagcaatatcaatgcaaaccggctcagcaaacaattatttccaagacatgggt
gtagaacgacaagccgtatatggggatagtgtgaaaacagagcaaaataatcaatccaat
cccggaacgctagatgttgaactgggaatagtacgacaaaacgaatattcagcatcgcaa
gtacaatttccaacaagtatggtgatgacctcgttaggcgatgtaagacaaggtgtaaac
tctaatttagaatgtagcaaccttaaccaacaaggtatagatcaaactcattcacatcat
ctacttgcgcaactgcaagaacaatcgcttggaatgaacgcagatatgtacatgatgcaa
gcaccaagtcacgaagtcgttacacaagtaaaacgacgagaagacgtattgtacggcggt
caaaatatgcaagaagtccatttactggaagatgagtctgaacatcaaatgcaacaccaa
actaagcttgagcaagacactttatatgagcaagaaaaaatggaattggacaacggtacc
cttggccaaaatatcagaggaaaaaagagacccaatgattctgatgatgcggcgtctttt
aatgattctaatttaaatgaaattgaaccggaccaaagtataacggatattgtgcaagga
acaccagggaacgagagcaaaaaggccgaagcggaacatttactgagtttggatccatgg
cgtgttgcaaagtctgtgaaggcatacatggctcagcataatattcctcaaagagaagta
gtagattcaacaggtctaaatcaaagtcatttatcacaacatttgaacaagggaacacct
atgaagcagcagaaaagatggcttctgtatgcttggttcatcaagaaaaaggaagaaata
aacgctcaatttcagattgctagtcatggcttgcctccagatcaagttgaagaagctgct
ggtgtgagcaaaagagccaggaggaatcgattcaaatggggaccggcatcacagagaatt
ctatacgacgcctatgaaagacaacgaaatccaactaaagatgaaagagaaaccctggtc
acactgtgtaacagagctgagtgtgcccaacgtggagtgtctccttctcatgaaagtggg
ttgggatcgaacttagttactgaggtgagagtgtataactggttcgcaaacaggcgaaaa
gaagaagcatttcgtcataaacttgctcaagatggatcatatgcgaatgcagaaccagtc
gatattactaatgacggtagaccaacagatttaaaggtctccgtgggggatatttatgca
aaaggtattcagcgatattcattggaacaccaccaacagagtcaagaacctatgaagtca
tcaagaagatctagtgtcaaatcccaaccaatgaaagggaacaggagtagcaatgcaaca
ggcaatttaaacaaccatcccagccaaagcggtggaggtattgccttcgttacacaactt
ccgcaggaatcaattgaacaaagattggaacaaaatggtgcaattattagtaatacatat
agcatgatgacaaatgttactcaagtcaagggtgcgacaatgtgttcgctgccatctgtc
aatacattatcaccaattgtgaatgcccatcagatacagcaaagcgctatcacaggtcat
tatagccacaatggtatcgatgcatcagctgtttctcaagacccgttacatcaagggttg
attttgaatggaatcttcacacaaggtctccctcctcaaggaaccataatgacgtctctg
cccactgtacgacagacaaataattcgtcttctccgtcgccagcaaatatcgtgaatgaa
catcatcaacttgctgctcaatatcaaaactcaacagcgaactacgttcagtcagcattc
cccgtcacgtgtcataccaaaggcgcaacgagagcatatcaatttataacagcttcaccg
tactccggatctgtaccatgcacaacaggaggaatccaaatcccggagggtggaatacaa
cagtttattcttgcatctcaaactgaaaaccaagtaaattcgatgagaattccaacagaa
aataatcggcaagaaaatttgatatctggtggtaatcattctttgataacacaagaacat
ccggagacatcacctaatcaacagcagcaaaggctaacgtatcgtcaataa
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integrated database retrieval system
