Styela clava (leathery sea squirt): 120344681
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Entry
120344681 CDS
T07291
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120344681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclv03032
]
120344681
03036 Chromosome and associated proteins [BR:
sclv03036
]
120344681
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120344681
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120344681
DNA replication proteins [BR:
sclv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120344681
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120344681
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120344681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
PARP_reg
BRCT_2
BRCT
VWA_2
VWA
PTCB-BRCT
TraL_transposon
Motif
Other DBs
NCBI-GeneID:
120344681
NCBI-ProteinID:
XP_039269913
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MGINRLEDFEVKSKHICHKLKKSNCRLKSCSEKMKNLVLDSTGSLQNRHEKEMNLIDSNK
GWLYHFTDKDPKVRRHFWCVDDEYVTVFLTESESLFFKKISLASIKSIKESKKSKCLFKL
VLSNMTIFVTSSDSEKYKMILMNHWYNMLKEAHSAAVKRENTVLPLEQKKLSKHGSIFKK
LQFSLELGDTTYEAKKHLREQITSNGGQISYILNGNTDYLIVCERKTSTSSKSYKIHKAR
ELGIPIVREIFITECIENDKIVDFLDYVHGKPIVESYSAGKILVSKAKPKEPSERFEVEK
VIKYKVDAGDCPVFPDNFQVAKYSILAKITEERTPNDMYCVETQVGLHDNCKTIFRVMVS
YKNVSGVSFCHVYPVQTSSEVVQCYESLVKQFIADGFKKVIGIPGDGFSGIASAPLSLLL
NEMKISSGIIHPEVARLVESAWLESLCEIMTNFGVEPFTIHHEQIRNAMIVLMQIKNSIK
RKSFKLELSNKFYQFIPQRDGRKELIDNMQKITKMRELCQLLKDITLSNETSWISKDFND
RLSQYTALKCAIMWIDSKEKEYKLIKDLLPDNIDGKGYKVQNIFRVSRSVENSQFKSDIG
NTKLLFHASHPHNFVGILSRGLMLPLTLSSEYGVSRSDEGNLGAGIYFSDSFEMSLKFTA
RSQSRGSRIMLVNEVALGKVFYTKNPMTDLIVAPEGHHSVKGTGLTKFDDVDDIASHASE
YAIYDARQQKLRYLIEFTTTDDIMTIYDRVPVHLPFKQKEDKQVNETVGDNENFEPKVEE
VRYGLIMESKDISAILEEVHIRAKVIDLVSEVTIFQSYINMTNKTVEAKYVFPLTENAAV
CGFEAFINDKHVIGEVKEKEQAQKEYKKAVSEGHGAYLMDEEKPNVFSVSVGNIPPAARV
IIKISYVAELETTNEPDSNVLFTLPGSIAQWEEKSVLLSSSATQEVTESTSVSNEKKSSV
IISIDMPFDILDITSPTHKIVTKKTSTKACVKLQKSIHLDGNNFHLLIKVAEIHVPRIWI
EKENEESKDQVAMVTFFPEFEFDAVENFNCTVMLDMSNSMEGSAASHSKHLCSLLIDNLP
DQCDFNVISFGSYFEETFIRYENASTTSKKQAKDFITCCTPSFGGSDLFYILNSVFLLQN
NSCNNELHNIFLFSDGHLSEEERLLGLCKEISKTSHCQTRIFTFAVGNSPDNHTLQSLSI
LTGGSHEQFLSSSKRTWKRQLNNQLFNAKQPALTDVHIDWCNYDKEFDGFQDPTVLQVPE
KVKCLFSGSQLVAYSYVPNCLKATLSANINGKEFSTMVNANELCKITGMTLHRLAAKAVF
KEHDCGRLADDALCDQMLKEERKSIIISLSVKYSVVSKYTSFVAIEKRKPGEDLSITCGP
SLSDLVDESFIDIISEVTWGAEEKSVEENVDELLKKSLQMQSSSILQSRNLVLEAKALHS
TLEEKDPLRKLRIFATLCKLNVFEDNFNGWTEMKNLLLTRGKVLNFDVINAITNAEDLTF
LQDLFVVFKSCFPEHWTIQLSSVPKKFQALSVGAFSEIVGFCEDFPDCFEKVSIFWEKFR
KISCHDEKADKNLYFKTKELIRTFKSSILPLQLSDISEYIEKEKTVVGRLCAKSRRSSFL
HRPHKTSLMSESSANKSSAPKVHSDQTDHFGGIPTGVEGTVSDDINRNVGKAVIFSPQSP
LKTVSVRRSRSMKKRVISKYTPMRNDSELSPTSPVISEKAQSSAFHNISLKSAQFKVQRR
PIASIDDCLCLPDVTQTSFQDLHHDLKLLSNYDDLLSAASKSDDAQQQLNYEDFFSDPCT
QEIESISVSEFYGFPSQLEVKTDSIGVLEKEELKSSYSETMQSSKSSSNGSWLSRCDDEH
KQVNNVSHGVRYVPDYLSEEMEPDENEEYFEDFLSPISTSSFCDTFYTDLEHDKYADASN
ILGTIMKRFNLSESKLVDGLEHCATLGGFWRFPDEETISSNELSPAEYQMLSLFRNVVIS
AGAQSLGSQVLSLVTDMLLTAIVLEILKLVDDGNNMIVKNMLERGKKWLKYVDTLNPSLY
KRLELGSSWEMAAKLVINQLSEKLLEVTDIAMQSK
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgggaataaatagattagaggactttgaagtgaaaagtaagcatatttgtcataaactg
aagaagagcaattgcagattgaagtcttgtagtgaaaaaatgaaaaatctagtactggat
agtactggatctctgcagaacagacatgaaaaggaaatgaacctcattgattctaataaa
ggatggttgtatcatttcacagataaagatccaaaggtacgacgacacttctggtgtgtt
gatgatgaatatgtcacagttttcttgacagaaagtgaatcattgtttttcaagaaaatt
tcattagcaagcatcaaatcaatcaaagagagcaagaagtccaagtgcttgttcaagctg
gttctatccaacatgactatttttgtgactagcagtgattctgaaaagtataaaatgatt
ctgatgaaccattggtataatatgcttaaagaggcccattctgccgcagtaaaacgggag
aatactgtgctacctcttgaacaaaaaaaactctcaaaacatggaagcattttcaagaaa
cttcagttttctctggaactaggggatacgacgtatgaagcaaagaaacatttgcgtgaa
cagatcactagtaatggaggacaaatttcctatattttaaatggaaatactgattatctg
attgtgtgtgagagaaaaacttccacatcgagtaagtcctacaaaattcacaaggcaaga
gaactaggaatacccattgtgagagagatcttcataacagaatgtattgaaaacgataaa
attgttgattttctggattacgttcatggaaaaccaattgttgagagttattctgctggg
aaaatattggtttccaaggcaaagccgaaggagccttctgaaagattcgaagtagaaaaa
gtcattaaatataaagttgatgctggagactgccctgtttttccagataatttccaagta
gccaaatactctattctcgcaaaaattactgaagaaagaacaccaaatgatatgtattgt
gttgaaacacaggttgggttacacgataactgcaaaacaatatttcgcgtcatggtttcc
tataaaaatgtcagtggtgtatcattttgtcatgtttatcctgtgcaaacttcatcagag
gtggttcagtgttatgagtccttggtaaagcagtttatcgctgatggattcaagaaagtc
attggaattcctggcgatgggttctctggaattgcttctgctccactgagtttgctttta
aatgaaatgaaaatttcatctggaattattcatcctgaggtcgctcgattggtagaatct
gcgtggttagaatctctttgtgaaataatgacaaattttggtgttgaaccttttactata
catcatgaacaaattaggaatgcaatgattgttctgatgcagataaaaaattcaatcaaa
agaaaaagttttaaattggaattatcaaataagttttaccagtttattccccaaagagat
ggtaggaaggaactgatagacaacatgcaaaagatcacaaaaatgagggaattatgccag
cttttgaaagacataaccttgtccaatgaaacttcttggatttctaaagacttcaatgat
cgcctgtcacaatataccgcattgaagtgtgctataatgtggattgactcgaaagaaaaa
gaatataaactcatcaaagacttacttcctgataatatcgatggaaaaggatacaaagta
caaaatatattcagagtcagtcgctctgttgaaaactcgcagtttaaatcagatattggc
aatactaaacttctatttcatgcatcccatcctcacaattttgttggtattttatcgaga
ggtttaatgttgccactcacactgtctagtgagtatggagtctcaagaagtgatgaagga
aaccttggcgctggaatttatttctcagattcatttgaaatgtctttgaagtttacagct
cgaagccaaagtcgtggttccagaataatgcttgttaatgaagtagcactgggaaaagta
ttttatacaaagaatcccatgactgatttgatagtcgcgccagaaggccatcatagtgta
aaaggtacaggtctaacaaaatttgatgatgttgacgacattgcatctcatgcttcagaa
tacgcgatatatgatgcaaggcaacagaagttacgctaccttattgaatttacaacgact
gatgacatcatgactatttatgacagagttccagtccatttaccttttaaacaaaaagag
gataagcaggtgaatgaaacagtgggtgataatgagaattttgaaccaaaagttgaggaa
gttagatatggcctgatcatggaatcaaaagatatttctgcaatattagaggaagttcat
atcagagcaaaagttattgatttggtgtcagaagtcactatttttcagtcttacatcaat
atgaccaataaaactgttgaagcaaaatatgtttttcctctcactgaaaacgccgctgta
tgtggatttgaggcttttataaatgacaaacatgtaataggagaagtcaaagagaaagaa
caagctcaaaaggaatataaaaaagcagtaagcgaaggtcatggagcttatttgatggat
gaagagaaacctaatgtattttctgttagtgttggtaacattcctcctgcagctcgcgta
atcattaaaattagttatgttgctgagctcgaaactactaacgaacccgacagtaatgtt
ttgtttacattaccaggaagcattgctcaatgggaggaaaaatctgtgttgctttcaagt
tctgctactcaagaagttacggaatcaacttctgtttcaaatgagaaaaaatcttcagtt
ataatatcaattgatatgccgtttgatattctggatattacttcacctactcataaaatt
gtgacgaaaaagacatctacgaaggcttgtgtaaaactgcaaaagtcaattcacctggat
ggaaataattttcatttgctgatcaaagtagctgaaattcatgttcctcgtatttggatt
gaaaaagaaaatgaagaaagcaaagatcaagttgcaatggtgactttttttcctgaattt
gaatttgatgcagtagagaatttcaattgcactgtaatgctggatatgtcgaattccatg
gaaggatctgcggcatcccattccaagcatttgtgttcattgctgatcgacaatttgcca
gatcaatgtgattttaatgtcatctcatttgggtcatatttcgaagagacgttcattaga
tatgaaaatgcttcgactacttctaaaaaacaagcaaaagattttattacatgttgtaca
ccatcttttggaggatccgatcttttttacattcttaattcagtattcctacttcaaaat
aattcatgcaataatgagttacataatatattcctcttttctgatggtcatttgtctgaa
gaggaaagactgcttgggctttgtaaggaaatttcaaaaaccagtcattgtcaaacaaga
atttttacatttgctgttggaaattcaccagataatcacactctacagagtttatctata
ttaactggaggttcacatgaacaattcttatcttcatcaaagaggacatggaaaagacaa
ttaaacaatcaactattcaatgctaaacaacctgcattaactgatgtacatattgattgg
tgcaactatgataaggaattcgatggttttcaagatccaactgttttgcaggttccagaa
aaagtaaaatgtttgttcagtggatctcaacttgtcgcatacagttatgttccaaactgt
ctaaaagcaactctgagtgctaatattaatggaaaagagttttctacaatggtaaatgca
aacgaattatgcaaaatcactggaatgacattgcacagacttgcagcaaaagctgtgttc
aaggaacatgattgtggtagacttgctgatgatgctttgtgtgatcagatgttgaaagag
gaaagaaagtcaattattatttcattgagtgttaaatactcggttgtttcaaaatataca
agctttgttgctattgagaaaagaaaacctggagaagatttaagcataacatgtggacca
tctctgtctgatcttgttgatgaatcttttattgatatcatttctgaagtaacatggggg
gctgaagagaagtctgtggaagaaaatgtagatgaactactgaagaagtccttgcaaatg
caatcaagttctatactgcaatctcggaatttagttctggaagcaaaagcattgcatagc
acattggaagaaaaagatcccctgaggaaattacgaatttttgcaactttatgtaaattg
aatgtgttcgaggataatttcaatggatggactgaaatgaagaatttgttgttgacaaga
ggcaaagtgttgaattttgatgtgataaatgctatcacaaatgctgaggatttgactttc
ctacaagatttgtttgttgtattcaagagttgttttcctgaacactggacaatccaactt
agttctgttccaaaaaagtttcaagcactttctgttggcgctttttccgaaattgttggt
ttttgtgaagattttccagactgttttgaaaaggtctccatattctgggaaaagtttcgc
aagatctcatgccatgatgaaaaggcagataaaaatctttattttaaaacaaaagaattg
atcagaacattcaaatcttccattctcccgctgcaactatcagatatatctgaatatatt
gaaaaagagaagactgtcgttgggagactgtgtgcaaaatcaaggcgtagttctttcctg
cacaggcctcataaaacttctttgatgtctgaatcaagtgctaacaaatcatctgcacca
aaagtacattctgatcaaacagatcatttcgggggtattcccactggagttgaaggcact
gttagcgatgatataaataggaatgttggtaaagctgttattttttctccacagtctcca
ttgaaaacagtttccgttcgacgatcgagatctatgaagaagagagttattagtaaatac
actccaatgcgtaatgattcagaacttagtcctacatcaccagttatcagtgagaaagca
caatcttcagctttccacaatatttctttaaagtcagctcagtttaaagttcagcgaaga
ccaattgcatctatagatgactgcttgtgtctgccagatgtgactcagacatcttttcaa
gacctccatcatgacctaaaattgttatccaattatgatgatcttttgtctgctgcttca
aagtctgacgatgcacagcaacaacttaattatgaagacttcttttcagatccatgtact
caagaaattgaaagtatcagtgtgagtgaattttatggatttccaagtcagttagaggta
aaaacggactccattggagtgttggaaaaagaagaattaaaatcatcgtatagtgaaacg
atgcaatcctcaaaatctagttctaatggtagctggttatctaggtgcgatgatgaacat
aaacaagttaataatgtttcacatggagttcgttatgtaccggattatttatctgaagag
atggaaccagacgaaaatgaagaatattttgaagattttctttctccaataagcacaagt
tcgttttgtgatacattttatactgatcttgagcatgataaatatgccgatgcatccaac
attctcggaacaataatgaaacgatttaatctctctgagagtaaattagtggatggtctt
gaacattgtgcaacacttggtggattttggaggtttccagatgaagaaacaatttcttct
aatgagctatctccagctgaatatcaaatgctttcattatttcgcaatgttgtaatctcg
gcaggtgctcaatctcttggcagtcaagttttatcattagtcacagacatgttgttaact
gcaattgttttggaaattcttaagcttgtcgacgatggaaataacatgattgtgaagaat
atgcttgagcgtggcaaaaaatggttaaaatatgtcgatacattaaacccatctctgtat
aaacgacttgaattaggttcgtcttgggaaatggcagcaaagttggtgatcaatcaatta
tctgagaagctgctggaagtaacagatatagcaatgcagtccaaatag
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integrated database retrieval system
