Schizophyllum commune: SCHCO_02622382
Help
Entry
SCHCO_02622382 CDS
T01331
Symbol
SCHCODRAFT_02622382
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
scm
Schizophyllum commune
Pathway
scm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCHCO_02622382 (SCHCODRAFT_02622382)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_02622382 (SCHCODRAFT_02622382)
Enzymes [BR:
scm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCHCO_02622382 (SCHCODRAFT_02622382)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SCHCO_02622382 (SCHCODRAFT_02622382)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
9586074
NCBI-ProteinID:
XP_003036613
UniProt:
D8PQK3
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MPDGSAGPSRQPTFDTLKREKLFRHPPRDSASYNILNEFVAPHLESFNALFDDSGLPSGD
GDGRGLLSLGIEEIGERVVFDGDGRPESEHGATGWGNRMRIWIDSVNIARPMLSDRETFS
KQRKIFPTEARERLTSYRGRMTMKICWTDSHGNKNDMVKECGLVPIMVRSVRCNLRGMSS
AQLVAHREEAEEFGGYFVINGNERLIRYLILPRRNHVISLLRPSFANRGPSYTPHAVQIR
CVRPDQTSVTNTLHYLSNGMAMLRFSWRKQEYVIPIMLILKALVGASDKEIFEGVVMQDF
ENTFLTDRVELLLRSFKAYTMRTGNQCLEYLGDRFRVVLNLPEDWTNLAVGTWLVNKMVL
VHLPTPREKYNMLLFMLRKLYALVSGECCADNPDSPQHQEVLLPGTLYGMIIKERCEEVL
NGIRAGIMSDVRNGVVVDFNDKRYMTKVMSKVSFDIGAKLSNFLATGNLVSPTGLDLQQA
SGFTIVAEKLNWQRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGL
LNHLSRTCRITTTPLIVAHIPALLAAHGMTQPFAGRINGRTNICVQLDGRVIGWARPAVA
QQLANNLRIWKTEGMHEVPMDLEIGLVLESKGGQYPGLFLFSSRSRFMRPVKYLPNGRDD
QVGSFEQVYMNIACLPEEIEPGVTSHVEHNPTNFLSILANMTPFSDFNQSPRNIYQCQMG
KQTMGTPSTAINHRTDNKLYRLQTGQSPIVRPALHNTYAMDAFPNGTNAIVAVISYTGYD
MEDAMILNKSAHERGFGYGTVYKSAIIDLKDQKGATKSSSAPTLHFGLGKDIRRTGDKAH
ACTEFVGEDGLPLVGVKLTAGDPMAAFINDVTGRTQFQKYKGDETAYVDQVRLLGGDNGD
TELQKIQVTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFSESGMQPDVIINPHAFP
SRMTIGMLVESMAGKAGAMHGLAQDATPFKFSEEDTAVDYFGKQLLAAGYNYYGNEPMYS
GITGQEFAADIYLGVVYYQRLRHMVLDKFQVRTTGQVDPLTRQPVKGRKRGGGIRLGEME
RDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDVALGERVLGKDASFRPSG
PGGEYCRVCRKAAEEEEERARQNAAAPTDDAPRRPAADVRVAIPSQNVLGTAKKGGDLDV
VAVPYVFRYLCAELASMGIGVSLEVQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggctcagctggtccctcgcgccagcccacattcgacaccctcaagcgcgag
aagctcttcagacatcctccgagggacagcgcgagctacaatatcctcaacgagtttgtc
gcgccgcatcttgagtccttcaatgcattgttcgacgactcgggactgccttcgggtgat
ggtgacggccgcggactgctgagcctcgggatagaagagatcggggagcgcgtcgtcttc
gatggggacggccgcccggagtccgagcacggagcgactgggtgggggaaccgtatgcga
atatggatcgactccgtcaacattgcaagacccatgctgtccgaccgcgagaccttctcc
aaacaacgcaagatcttccccacagaggcgcgcgaacgccttacctcctaccgggggcgg
atgactatgaagatctgctggacggactcgcacggaaataagaatgacatggtcaaggag
tgtgggctcgtaccaatcatggttcgctccgtgcggtgtaacctccggggcatgtcctcg
gcccagctcgtcgcacatcgcgaggaagctgaggagttcggcggctacttcgtcataaac
ggcaacgagcgcttaatccgctacctcattctcccccgccgcaaccatgtcatctccctc
ctccgaccctccttcgcaaatcgtggtccctcctacacacctcacgctgtccaaatacga
tgcgtccgccccgaccagacgagtgttacgaacacactgcactacctctcaaacggcatg
gccatgctgcgctttagctggcggaagcaggagtatgtgatcccaatcatgcttatcctg
aaggcgctcgtcggcgcgtcggacaaggagatcttcgagggtgtcgtgatgcaggacttc
gagaacacgttcttgaccgatcgcgtcgagctgctactgcgtagcttcaaggcctacact
atgcgcactgggaatcaatgcttggaataccttggcgaccgcttccgtgtcgtgcttaac
ctcccggaggactggacgaaccttgcagttggcacctggctggtgaacaagatggttttg
gtgcacctgcccacacctcgtgagaagtacaacatgttgctgttcatgctgcgcaagctg
tacgcattggtgtccggcgaatgctgtgcggacaatcctgattcacctcaacatcaagaa
gtccttttacctggcacgctgtacggcatgatcatcaaggagcgctgcgaagaggttctc
aatggaatccgggcgggcattatgagcgacgtccgcaacggggttgtcgtcgattttaac
gataaacgctacatgacgaaagtgatgtcgaaagttagcttcgacatcggcgccaaactc
tccaatttcctcgccacgggcaacctcgtctccccaactggcctcgatctgcaacaagca
tccggcttcactatcgtcgccgagaagctcaattggcagcgatacataagtcacttccgc
tgcatccatcgtggtgctttcttcgccgagctcaagacgacgacggtccgcaagctacta
cccgaggcctggggcttcctctgtcccgtgcatacgccagatggttcgccatgtggtttg
ctcaatcacttgtcgcgtacatgtcggattactacgaccccgctcatcgttgcacatatc
cctgccctccttgccgcccatggcatgacccagccgtttgcaggacgcatcaatggacgc
acaaatatctgcgtgcagctggacggtcgcgtcattggttgggcacggcctgcagtcgca
cagcagctcgcaaacaacctacgaatatggaagacggaggggatgcacgaagtgccgatg
gatctcgagatcggtctggtgttggagtcgaagggcggccaataccctggcttgttcttg
ttctcgtcgcggtcaaggttcatgcggccggtcaagtacttgccgaatggacgcgacgac
caggtcggttcgttcgagcaggtgtacatgaacatcgcatgtttgcctgaggagattgag
ccgggcgtgacatcgcatgtcgagcataaccccaccaacttcctctccatcctcgccaac
atgacgcccttctccgacttcaaccaatccccgcgtaacatctaccagtgtcagatgggt
aaacaaaccatgggtaccccatcgaccgccatcaaccaccgcacggataacaagctgtac
cgcctgcaaacaggccaaagccccatcgtccgccccgccctccacaacacctacgccatg
gacgccttccccaacggcaccaacgccatcgtcgccgtcatctcctacaccggttacgac
atggaggacgcgatgatcctcaacaagtccgcgcacgagcgcggcttcggctacggcacc
gtctacaagtccgcaattatcgacctgaaggaccagaagggcgcgacgaagtcctcgtcc
gcaccgacgttgcacttcgggctggggaaggacataaggaggacgggggataaggcgcat
gcgtgcacggagtttgttggggaggatgggctgccgcttgtgggtgtgaagctgaccgcg
ggcgatccgatggcggcgttcatcaacgacgtgactgggcggacacaatttcagaagtac
aagggcgatgagacggcctatgtcgaccaggtccgattgctcggtggcgacaacggcgac
acggagctgcagaagatccaggtcactcttcgtatcactcgttcgcccgtcattggcgac
aagttctcgtcgcgacacgggcagaagggtgtctgctcgcagaagtggcccgcggtcgac
atgccgttcagcgagagtggtatgcagccggatgtcatcatcaaccctcatgccttcccc
agtcgaatgaccatcggcatgttagtcgagagtatggcgggcaaggcgggtgcgatgcat
gggttggcgcaggatgcgacaccgttcaagttctcggaagaggacacggcggtcgactac
ttcggcaagcagctcctcgcagccggttacaactactacgggaatgagcccatgtactcg
ggcatcactggccaggagttcgccgccgacatctacctgggcgtggtctactaccagcgt
cttcgtcacatggtgttggacaagttccaagtccgtacgactggtcaggtcgacccgctc
acgcggcaacccgtcaagggtcgtaaacgcggtggtggtatccgtctgggtgagatggag
cgtgacgcgctcatcgcccacggaacgtccttccttcttcaagaccgcctcatgaactgc
tccgactactcaaccgcctgggtctgccgcacctgcggcagcctcatctccctcggctac
gacgacgtcgctcttggcgagcgcgtcctcggcaaggacgcctccttccgaccctccggc
cccggcggcgagtactgcagagtatgccgcaaggccgcggaggaagaggaggagcgtgcg
aggcaaaacgctgcggcccccacggacgacgcgccaagacggccggcagcggacgtgcgg
gtggcgatcccgtcgcagaatgttctggggacggctaaaaagggcggcgacctggatgtg
gtcgctgtcccgtatgtatttaggtatctgtgcgccgagttggcgtctatgggtatcggc
gtatcgttagaggtgcagtag
DBGET
integrated database retrieval system
